| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1731 |
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| Symbol | |
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| ID | 2739189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1785622 |
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| End bp | 1787025 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637160614 |
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| Product | hypothetical protein |
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| Protein accession | NP_972335 |
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| Protein GI | 42527237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00706224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAA ACACGGATTT AAAAAAATAT GCTCTTATCG GTACAAAGCG CTTTTGGTTT
TTAATGTGGG GCTTGGGCCT TGCAGGGCAG TTATGCTGGA ACATCGAAAA TCAGTGGTTT
AATACCTTCG TATATGCTAA AATAGCAAAG GACTCTTCGA TAGTAACCCT TATGGTTATT
ACGAGTGCAT TAGTAACAAC CTTTTCAACT TTTTTATTCG GTACCTTATC CGATAGGATA
GGCTCAAGGC GACGATTTGT TTCGATAGGC TACATCGTCT GGGGGCTTAC CACCATCCTT
TTCGGCTTGA CCGAATTTGT AGGAAGAGGA CAGGTCGGAA CAGGGGCTAA GGTATCTGTA
TGGGCTGCCG TTCTTGTTAT CCTTGCCGAT GATTTTATGA GTTTTTTCGG TTCGATGGGA
AACGATTCGG GCTACAACGC ATGGAGCAAC GATATGACAA CGGATAAAAA CCGCGGACAG
GTTGGGGCTG TGCTTGCAAT TCAGCCCGTT ATAGGTACTA TAGTCGGCAC TGTGCTGGGC
GGTCTTTTAA TAGGAGCCGA AAATAATTAC CAGCGTCTTT TTTGGTCTAT GGGTTTGTTT
GTCATAGGTA CCGGTCTTAT TTCACTTTTT TTGTTAAAGG ATGCTCCCGA TTTAAAACCG
CATAAGGAGG GTTCTTTTGG CAAACAGTTT GCTGCGATTT TTAAGGCTGA AGGCTTTTTT
TCGCATAAAG AACTGATGCT CGCCTGTATA ACGACAGCCG TCTTTTTTAT TTCGTTTAAT
GTTTATTTTG TTCACATGGG AAACTGGATG ATTTACCGCA TGGGCTTTGA TGCTGCCCGC
ATGGGAATAA TTCAGGGTTT AAGTTTGCTT GCTGCCTCCT TATCGGTTAT TCCTGCAATA
GGCCTTATAA ATAAAAGCCG AACGCCGCGC CTTGCCGCAT TTGCAATTAT TCTTAACAGT
TTGGGCCTTT GTATTTTATC TCTTTTTATA AAGCCGGCCT CGGTTAACCC TGATGCAGTG
TTCAGCCTGA AAAATATTTC TCTTTTTTTG TCCGTATTTT TAGCCGGTAC GGGACAGATT
CTTGTAACCC AATCGATGAC TATGTGGGTA AAGGAGCTAT ACCCCGAAAC CTCTCGAGGA
CAGTTTGAAG GTATGCGTAT TCTCTTTTTT GTGTTGACTC CGATGATTAT CGGAACAATA
ATAGGAAATT TTTTGGTAAA AAATGGGGCA GGCTCGGTGG TAAACGAATT CGGCATAACC
GAAAATATTC CCGTAGAGTC TATCTATGTA TGTGGTGCCG TTTTAGCCCT CTGCGCCTTT
ATTCCACTTT ACTTTGCATC TAAGCTTTAC AATAAGCGAA AAAACAATGA GCCTAAGGAC
ACTGAATCCT ATGAGAAAAA ATAA
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| Protein sequence | MLKNTDLKKY ALIGTKRFWF LMWGLGLAGQ LCWNIENQWF NTFVYAKIAK DSSIVTLMVI
TSALVTTFST FLFGTLSDRI GSRRRFVSIG YIVWGLTTIL FGLTEFVGRG QVGTGAKVSV
WAAVLVILAD DFMSFFGSMG NDSGYNAWSN DMTTDKNRGQ VGAVLAIQPV IGTIVGTVLG
GLLIGAENNY QRLFWSMGLF VIGTGLISLF LLKDAPDLKP HKEGSFGKQF AAIFKAEGFF
SHKELMLACI TTAVFFISFN VYFVHMGNWM IYRMGFDAAR MGIIQGLSLL AASLSVIPAI
GLINKSRTPR LAAFAIILNS LGLCILSLFI KPASVNPDAV FSLKNISLFL SVFLAGTGQI
LVTQSMTMWV KELYPETSRG QFEGMRILFF VLTPMIIGTI IGNFLVKNGA GSVVNEFGIT
ENIPVESIYV CGAVLALCAF IPLYFASKLY NKRKNNEPKD TESYEKK
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