10 homologs were found in PanDaTox collection
for query gene Spea_3955 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_3955  hypothetical protein  100 
 
 
338 aa  691    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3587  hypothetical protein  38.91 
 
 
317 aa  187  2e-46  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0795  hypothetical protein  32.84 
 
 
250 aa  162  6e-39  Shewanella baltica OS155  Bacteria  normal  0.0304356  n/a   
 
 
-
 
NC_010506  Swoo_3430  hypothetical protein  31.48 
 
 
253 aa  156  6e-37  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2714  hypothetical protein  34.12 
 
 
251 aa  155  9e-37  Shewanella loihica PV-4  Bacteria  normal  0.572557  hitchhiker  0.0000684426 
 
 
-
 
NC_009831  Ssed_0255  hypothetical protein  32.36 
 
 
296 aa  155  1e-36  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0197  hypothetical protein  34.62 
 
 
277 aa  150  3e-35  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0197  hypothetical protein  34.91 
 
 
277 aa  149  7e-35  Shewanella baltica OS155  Bacteria  normal  0.331771  n/a   
 
 
-
 
NC_008345  Sfri_3123  hypothetical protein  30.77 
 
 
249 aa  147  4.0000000000000006e-34  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0298  hypothetical protein  29.45 
 
 
321 aa  124  2e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0945174  n/a   
 
 
-
 
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