Gene Sfri_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3123 
Symbol 
ID4280026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3737317 
End bp3738066 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content40% 
IMG OID638135942 
Producthypothetical protein 
Protein accessionYP_751799 
Protein GI114564285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG TTACTGCATT AGCACTAGTA TTAGGTTTTG TGGCTTTACC CGCTATGGCT 
GCACAAGATG CACCATTTCA CCACGAAGCT GGTCTAAAAT ATTCTGCTAA TACTGAAGAA 
TTCGGTGATG GTCTATGGGA CCTTGACTAC CGTTTTTATC TTGACTCTGT ATCACAAGAA 
AAAGGCCCTT ATGCTTTAAA TGGCTTTTTA GCACAATCTA CTAATGTTGG TGCTAGCTAC 
TCAATGCAAG ATGACATTGA CCTTGATATT TTTTCTGTTG ATGGCACGTA TGTTTTCGAT 
TCAAAGTGGT TTGTTGGCGC TAAAATCGAA CGTTATGATG CTGGCAGTTT TGATACTGAC 
ACTTATCAAC TAGATCTTGG TTACTACTTC AACGACAGTT CAAAAGTAGC TGCATTCTAT 
GTTGATGGTA GCGATATTGA TTCAATCTAC GGTCTTGAAG TTCGCAGCTT TATCGATCTT 
AAAAGCACTA CTGGTATTGA TTTAGGCGCT AAGTGGACTC ATACCGATGC TGACGATATC 
TTCAACGTAA ATGCTGACTG GTATGTAACC AAAGAATGGT CTGTTGGTTT GGGTTATGAC 
GATAACGGTT CAGACGATAA CTTTACTGCT AAAACAGCTT ACTGGTTACG CATGTCTGAC 
GCTTTCTCTG CTACATTTGA GCTAGCAAAA GTACTCGATT CTGACGTAGA CGGTTTATTT 
GTTGGTGTGG GTGTTGTTGG CCGTTTCTAA
 
Protein sequence
MKNVTALALV LGFVALPAMA AQDAPFHHEA GLKYSANTEE FGDGLWDLDY RFYLDSVSQE 
KGPYALNGFL AQSTNVGASY SMQDDIDLDI FSVDGTYVFD SKWFVGAKIE RYDAGSFDTD 
TYQLDLGYYF NDSSKVAAFY VDGSDIDSIY GLEVRSFIDL KSTTGIDLGA KWTHTDADDI 
FNVNADWYVT KEWSVGLGYD DNGSDDNFTA KTAYWLRMSD AFSATFELAK VLDSDVDGLF 
VGVGVVGRF