| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2714 |
|---|
| Symbol | |
|---|
| ID | 4922944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3212018 |
|---|
| End bp | 3212773 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640164309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001094839 |
|---|
| Protein GI | 127513642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.572557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000684426 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CAGTAACAGC CGTTGCCATT CTTCTTGGTC TTAGCAGCAT GAGCGCCATC
GCTGCCCAGG ACAATGCCTT TCAACACGAA GCCGGTTTGA ACTATAAGTC TAACTCTGAA
GAGTTTGGCG ATGGTATCTG GAACGCGAAC TACCGCTACT ATGTGACGCC AGTGGATCAG
AAAAGCAGCC CATATGCTTT AAATGGCTTC CTGGCGCAAA GCTCTAACCT GGGTGCTTAT
TACAGCAACT TCGACGATGC CGACCTGGAC TCTTACGGTA TCGATGGTAC TTATGTATTC
GCCTCTAAGT GGTTTGTTGG CGTGAACTAT AACAAGCACG ACTATGCTAA CTTTGACTTC
GACACCTATG GCGCAGAAGT GGGTTACTAC TTCAACGACT CTTCAGCTGT GTCTGTCTTC
TATGCCGATG GTGATGAAGG CGTGGAAGAG AGCTATGGTG TGAAGGTTCG CAGCTATATC
GCGCTACAAT CTACTGCCGG TGTGGATCTG CAGGCTAACT GGACTCACAG CGACAGCGAC
GACATGATCA ATCTGGGTGC AGACTGGTAT GTGAACAATT CTTGGTCTGT GGGTCTGGGT
TACACCAACA CCGACGATGA TGATGCATTC GACGTGAGAA CCGCGTACTG GCTACGTATT
TCTGACAACG TCTCGGCTAA CTTCGAATTG GCTCGCGTAT TGGATTCAGA TTTCGACGGT
GTCAACATAG GTCTTGGCGT AGTCGGTCGT TTCTAA
|
|---|
| Protein sequence | MKKSVTAVAI LLGLSSMSAI AAQDNAFQHE AGLNYKSNSE EFGDGIWNAN YRYYVTPVDQ
KSSPYALNGF LAQSSNLGAY YSNFDDADLD SYGIDGTYVF ASKWFVGVNY NKHDYANFDF
DTYGAEVGYY FNDSSAVSVF YADGDEGVEE SYGVKVRSYI ALQSTAGVDL QANWTHSDSD
DMINLGADWY VNNSWSVGLG YTNTDDDDAF DVRTAYWLRI SDNVSANFEL ARVLDSDFDG
VNIGLGVVGR F
|
|---|
| |