10 homologs were found in PanDaTox collection
for query gene Smed_6160 on replicon NC_009621
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009621  Smed_6160  type IV secretion system protein VirB3  100 
 
 		 108 aa  212  1.9999999999999998e-54  Sinorhizobium medicae WSM419  Bacteria  normal  0.0419934  normal  1 
 
 
-
 
NC_011982  Avi_8225  type IV secretion system protein VirB3  74.77 
 
 		 108 aa  166  8e-41  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009469  Acry_3522  type IV secretion system protein VirB3  48.15 
 
 		 110 aa  86.3  1e-16  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_009475  BBta_p0256  Type IV secretory pathway AvhB3 protein  35 
 
 		 112 aa  71.6  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.990445 
 
 
-
 
NC_009508  Swit_5008  type IV secretory pathway, VirB3 family protein  35.24 
 
 		 111 aa  65.9  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.118647  normal  0.169253 
 
 
-
 
NC_008242  Meso_4347  type IV secretory pathway, VirB3-like  32.38 
 
 		 112 aa  64.7  0.0000000004  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009432  Rsph17025_4377  type IV secretory pathway, VirB3 family protein  40.22 
 
 		 109 aa  64.7  0.0000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0676  type IV secretory pathway VirB3 family protein  31.87 
 
 		 113 aa  61.2  0.000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009717  Xaut_5087  type IV secretory pathway VirB3 family protein  30.3 
 
 		 112 aa  60.5  0.000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010657  SbBS512_0037  triC protein  34.88 
 
 		 915 aa  40.8  0.007  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
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