10 homologs were found in PanDaTox collection
for query gene Sfum_3488 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_3488  von Willebrand factor, type A  100 
 
 
268 aa  548  1e-155  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.259485 
 
 
-
 
NC_011729  PCC7424_1830  von Willebrand factor type A  32.77 
 
 
573 aa  48.9  0.00008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_0818  von Willebrand factor type A  29.55 
 
 
607 aa  47.4  0.0002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01450  hypothetical protein  30.92 
 
 
744 aa  47.4  0.0003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.657991  normal 
 
 
-
 
NC_009921  Franean1_7319  von Willebrand factor type A  30.22 
 
 
608 aa  45.8  0.0007  Frankia sp. EAN1pec  Bacteria  normal  normal  0.505027 
 
 
-
 
NC_014210  Ndas_3551  von Willebrand factor type A  29.61 
 
 
505 aa  45.4  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.104304  normal  0.664507 
 
 
-
 
NC_009654  Mmwyl1_1733  von Willebrand factor type A  27.5 
 
 
342 aa  44.7  0.002  Marinomonas sp. MWYL1  Bacteria  normal  0.818001  normal  0.561199 
 
 
-
 
NC_007802  Jann_1721  von Willebrand factor, type A  25.38 
 
 
1356 aa  43.5  0.003  Jannaschia sp. CCS1  Bacteria  normal  0.13107  normal  0.394888 
 
 
-
 
NC_009767  Rcas_4158  von Willebrand factor type A  28.22 
 
 
429 aa  43.1  0.005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.590263 
 
 
-
 
NC_010717  PXO_02345  von Willebrand factor type A domain protein  31.25 
 
 
335 aa  42.7  0.007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
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