| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01450 |
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| Symbol | |
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| ID | 8394037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 177145 |
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| End bp | 179379 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644984917 |
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| Product | hypothetical protein |
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| Protein accession | YP_003142567 |
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| Protein GI | 257062895 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.657991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC ACATGACACA CGAACTGCGC CGTACCTGCG CCTTTTGGAT TCTGGCTTTT
GCGCTTGCTG TCACGTGCGC GGCGCTGCAG GCCCAGGACG CCTTCGCCTA CGACGAGAAC
GGCGATCCGG TCGTCGTGTC CATCGGCGAC TCCTATTCTT CCGGCGAAGG CATCGAACCC
TTCTACGACC AGGACCTTCC CATGAAGGAG AAGGTTGAAA GCCAAGACTG GCTCGCCCAT
AGGTCCGAGC TGTGCTGGTC GGGGCGGCTG GTTGTGAAAG ACGTCGACGG CAACGAGTTC
CTCATGAAGG ACCATCGTGA CACGAACTGG TATTTCGTGG CCTCGTCCGG CGCGGTCAAC
GCCAATTTCT ACGGCCCGCA ATCCAAGCCC TATGTATATG AGGAGACGGT GGGCGCCGGA
AACTCATACC ACGTCGAAGG GGAGGGGTCG ATCATTCCCC AGGCGGACGT GTTCTACGGC
ATCGAATCCG GAACAACCGA TTACGTCACC GTGACCATGG GCGGAAACGA CGTGGGGTTC
GTCGACATCG TCACGACCGC TGCGATGAAC GACATCCCTG TTCTAGAGCG CGGGAACCTG
CGGGACAAGC TGGGGAACGT GTGGGGCGAG TTCTACAAGG ACCAGGGTGT TCGCGACTAC
CTCAAACTCC TGTACGGGAA CATCGCTTAC GAGGCGGGGC CGCAGGCGAA GATCATCGTC
GCAGGATATC CTGAGCTGAT CTCGCGGGAA GGCAGCGGCT TTCTGTTCAG CGCGGAGGAT
GCGAAGCTCA TCGACGACTC CGTCCAGGCC TTCAACGACG AGATCCAGAA CCTGGTGGAA
GAATGCCAGC AGGAGGACAT GAACATCTAT TTCGTGTCTG TTCAAGACGA ATTCGCAGGT
CATGAGGCTT ACACGTCCGA CGAGTACATC AATCGGGTAA AGATCAACGC GCAGCCGCAG
GACCTGAAGC CTGAGGGTCC GAGCGCTTAC TCCGTCCATC CGAACGATAA AGGCGCCGCT
GCGTATGCCC GGTGCGTGCA GCGCATGATC GACGACATTC AAGAGTGCGA AGACAACGGC
GTCGATCCGC GTACTCTGAT GGGCGACAGC AAAGTGGACC CCAACGACGC GTCGAGCAGG
CATGTCGTGT TGGCCCTGGA TACGTCCGGC AGCATGGACG GCGAGCCTTT GAACGAGACG
AAGACGGCCA CGCGGGAATT CGCCAGCACC ATTTTCAAGA GCGACGCCGA CGTGTGCCTG
GTGAGCTACG ACAGCTCCGC GCGCAACGTG ATCGACTCGA CCGACAACGA GTACGCCCTG
AAAGCCGCCG TTCGCGACCT GTCTGCGGGC GGAGGCACCA ACATCGAGGA CGCTTTGCGC
GTGTCCTATG AGCGGCTTGA GGGCAGCGGA TCGGACAAGC GGATCATCGT GCTGATGAGC
GACGGTGAGG CCAACGAGGG CCTGGTCGGC GACGACCTGA TCGCCTACGC GAACGAGATC
AAGGACGACG GCGTGACCAT CTACACGCTG GGATTCTTCC AGAGCGTGTC CGACAAGGCC
GAATGCCAGC GCGTCATGGA GGGCATCGCC TCGCCCGGGT GCCACTACGA GGTGGACGAC
GCCTCGCAGC TGCGCTACTT CTTCGGGGAC ATCGGCGACG ACATCAACGG CACGCGGTTC
ATCTACGTGC GCATAGCCTG CCCCGTCGAC GTGCGCGTCA GCACTCCGGA CGGTGTGCTG
GACTCCAGCG ACGACAACCT GAGTACCCGC GCCGATTTTG GATCGTTGAC CTTTGAGGAG
ACCCGCGACG GTGATGGCGA GGCTGACGAC GAAGAGGCCG AGGATCGCGT CAAGATCCTT
CGTCTGAAAG AGGGCGAGCC TTACAACGTC GAGATCACGG GCACGGGGTC GGGCACGATG
AACTGCACCG TCGGCTTCGA AGATGAGAAC GGCGACTATG CTGACCTGCG GGAATTCGAA
GACGTTCCCG TGAACCGCAA CATGCAGGCC GACATGACCG CCGAGGTTTC CGACATCACG
ACCCTGAAGG TGGACGAAGA CGGCGACGGC TCCTACGACG TGACCTATGC CGCCGAGGCG
AACTCCACCG CCGAAATCAT GGACAACTCC CGTGTCGGCT ACTACACGGC CCTTGCCCTG
TGCATAGCCG CCCTGGCAGC CGTTATCTTG GGCATCCTGT ACACCGCCCA TCGCGTGCGA
ACCATTCGCC GCTAA
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| Protein sequence | MSEHMTHELR RTCAFWILAF ALAVTCAALQ AQDAFAYDEN GDPVVVSIGD SYSSGEGIEP
FYDQDLPMKE KVESQDWLAH RSELCWSGRL VVKDVDGNEF LMKDHRDTNW YFVASSGAVN
ANFYGPQSKP YVYEETVGAG NSYHVEGEGS IIPQADVFYG IESGTTDYVT VTMGGNDVGF
VDIVTTAAMN DIPVLERGNL RDKLGNVWGE FYKDQGVRDY LKLLYGNIAY EAGPQAKIIV
AGYPELISRE GSGFLFSAED AKLIDDSVQA FNDEIQNLVE ECQQEDMNIY FVSVQDEFAG
HEAYTSDEYI NRVKINAQPQ DLKPEGPSAY SVHPNDKGAA AYARCVQRMI DDIQECEDNG
VDPRTLMGDS KVDPNDASSR HVVLALDTSG SMDGEPLNET KTATREFAST IFKSDADVCL
VSYDSSARNV IDSTDNEYAL KAAVRDLSAG GGTNIEDALR VSYERLEGSG SDKRIIVLMS
DGEANEGLVG DDLIAYANEI KDDGVTIYTL GFFQSVSDKA ECQRVMEGIA SPGCHYEVDD
ASQLRYFFGD IGDDINGTRF IYVRIACPVD VRVSTPDGVL DSSDDNLSTR ADFGSLTFEE
TRDGDGEADD EEAEDRVKIL RLKEGEPYNV EITGTGSGTM NCTVGFEDEN GDYADLREFE
DVPVNRNMQA DMTAEVSDIT TLKVDEDGDG SYDVTYAAEA NSTAEIMDNS RVGYYTALAL
CIAALAAVIL GILYTAHRVR TIRR
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