13 homologs were found in PanDaTox collection
for query gene Rpic_2252 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_2252  hypothetical protein  100 
 
 
531 aa  1096    Ralstonia pickettii 12J  Bacteria  normal  0.632916  normal 
 
 
-
 
NC_012856  Rpic12D_1688  hypothetical protein  77.78 
 
 
525 aa  738    Ralstonia pickettii 12D  Bacteria  normal  normal  0.3838 
 
 
-
 
NC_012856  Rpic12D_1928  hypothetical protein  98.31 
 
 
531 aa  1083    Ralstonia pickettii 12D  Bacteria  normal  0.163722  normal  0.0157636 
 
 
-
 
NC_012856  Rpic12D_3326  hypothetical protein  66.8 
 
 
532 aa  615  1e-175  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3325  hypothetical protein  67.8 
 
 
526 aa  614  9.999999999999999e-175  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3649  hypothetical protein  66.93 
 
 
499 aa  605  9.999999999999999e-173  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3218  hypothetical protein  30.17 
 
 
493 aa  97.8  4e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0359272 
 
 
-
 
NC_010552  BamMC406_3368  hypothetical protein  28.98 
 
 
447 aa  95.1  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5207  hypothetical protein  28.57 
 
 
446 aa  92.4  2e-17  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.00402588  normal  0.851631 
 
 
-
 
NC_008391  Bamb_5206  hypothetical protein  27.76 
 
 
446 aa  90.5  6e-17  Burkholderia ambifaria AMMD  Bacteria  decreased coverage  0.000638061  normal 
 
 
-
 
NC_010552  BamMC406_3369  hypothetical protein  27.82 
 
 
492 aa  89.4  1e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5510  hypothetical protein  28.81 
 
 
451 aa  89  2e-16  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5508  hypothetical protein  29.36 
 
 
445 aa  81.3  0.00000000000004  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
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