Gene Rpic12D_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1928 
Symbol 
ID8019585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2047680 
End bp2049275 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content62% 
IMG OID644830712 
Producthypothetical protein 
Protein accessionYP_002981881 
Protein GI241663521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0157636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACT TGTCTTGTTT GAGCCCATGC AGGCGCGCGC TGAAGGCCAC GCGCGTGCTG 
GCCGCCGCCT GCCTGCTGTT GACCGTTAGT TATTCTGGAG TGTCGATGTC CGCCAACGAT
TCGTATTCCC GCAAGCCCGT GGCCTGGCCG CGTATGCAGG CCGCCGCGCA GGCCGACCCG
AAAGCCCCCG CTGCCGTGCT GTTGGGCGTG CAATGGATCA ACCCGCTGAT GTGGCGGGAC
TACCCCACCC AATGGAACTT ACTTTGGGCG CAGGGCCTGG CCCAGCCCAA CGCCAATGAT
CGCGATGCAG CAAGATTCAA GCTTGGGGAT GCGGTAGGGG AATTAACGCT CGGGCTAGAG
CGCAAGAAGC GTCTAGATGA CTACCCGCAG ATCAAGCGCG ACAGGTTCTG GGGAGCCTAT
AGCAAGCTGT TGAGTGTTCC TCTAAGCACT TTCAGTTATC GCTACTTCAA CTCGGGTTTC
TACTCGATGG AGCAGGGTAC CGACCGGCCC GACTTCATGG ATGCCATCGT GTTCGCGGGT
ATGCCGCGCG AGTGGATCGG TACGCCCACG TACCTGAAGA ACTATGCCCT TGGCGATGAT
TGGAGCGTGG ATGAACTGCT GAAAGAGCAG GCCGCCATGG GCATGCCCGC GCCCAGCTAT
CTGGCCTACG ACGCCGCACA TGCCGAGCAA CGCATGCAGG ACTACTGGGT CAAGCTGCAC
AAAGACCCGA AGACCGGCGA AACCGTGCGC GGCCTGCGTA CTCGTGAACC AATGATCGTT
GGCGAGTCCA TTCTGTCGTT GCAAGGTGCA CGGAGACTGA TGTTCGACAA GGTGGCCGAT
GCCGCCTTCG CCAAAAGCAT GAAGTACAAC CCCAGCGGCA AGCTGCCACA GGTGGTGCTC
AAGGCTGGCG ACGAGACCGT GGGCTTCTAC GATCTGCAAG AGGCGCTCAA ATTCCTGGCC
GATAACCCCA ACAAGCTGGT GTGGGTGTGG AACATGGATG CGCCCAACTA CCCGATGGGC
GAGCAGACCA ACGAAAACAC CGCCCTCCTC ATCCTCGGCC ACCCCAGCGC CAACTGGGGC
TACGCGCCGC TCGCGTCCAT CTACACGCCG CAGCATCACG AAGGCGGCAT CGGCGCCAAG
GCCGCCAACC CGGGTGGCGC ATGGACGCCT CTGATGAAGA CGCTGCGAGA ACAGGCCTCG
CAGGATCACC CGGTCGAACG TGTCTATCAC GACGTGCACA AGCACACCGC CAACATCAAC
GCCCTGATGG GCCCACTGCA CGCCGCCGTC CACCAGCAAT GGCCCGACCT GGATCAAGTT
GGCAACTTCT ACAGCGTGTC CCAAGTCATG GAGGGTCCGG CCCGCGCCGC TAGCTTCGCG
GTCAACGCCG CCTTTGCCGC TGCCTACGCC AACCAAAGTG GCAAGAGCGC CGTCGTCACC
AGCGTGGCCG ATGCCAAAGA CAGCTGGGCG GTACTGATCG GCCCCCCGCC GGGCTGGCAG
CCGACGCCGC CAATCACGCA ATGGGACCGT GCGCGGGGTG AGGGCCGTGC GTACTGGCCG
TGGTTTGGCA AACAAACGGG TGACCGAAAA TCCTGA
 
Protein sequence
MPNLSCLSPC RRALKATRVL AAACLLLTVS YSGVSMSAND SYSRKPVAWP RMQAAAQADP 
KAPAAVLLGV QWINPLMWRD YPTQWNLLWA QGLAQPNAND RDAARFKLGD AVGELTLGLE
RKKRLDDYPQ IKRDRFWGAY SKLLSVPLST FSYRYFNSGF YSMEQGTDRP DFMDAIVFAG
MPREWIGTPT YLKNYALGDD WSVDELLKEQ AAMGMPAPSY LAYDAAHAEQ RMQDYWVKLH
KDPKTGETVR GLRTREPMIV GESILSLQGA RRLMFDKVAD AAFAKSMKYN PSGKLPQVVL
KAGDETVGFY DLQEALKFLA DNPNKLVWVW NMDAPNYPMG EQTNENTALL ILGHPSANWG
YAPLASIYTP QHHEGGIGAK AANPGGAWTP LMKTLREQAS QDHPVERVYH DVHKHTANIN
ALMGPLHAAV HQQWPDLDQV GNFYSVSQVM EGPARAASFA VNAAFAAAYA NQSGKSAVVT
SVADAKDSWA VLIGPPPGWQ PTPPITQWDR ARGEGRAYWP WFGKQTGDRK S