Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1928 |
Symbol | |
ID | 8019585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2047680 |
End bp | 2049275 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830712 |
Product | hypothetical protein |
Protein accession | YP_002981881 |
Protein GI | 241663521 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.163722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0157636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACT TGTCTTGTTT GAGCCCATGC AGGCGCGCGC TGAAGGCCAC GCGCGTGCTG GCCGCCGCCT GCCTGCTGTT GACCGTTAGT TATTCTGGAG TGTCGATGTC CGCCAACGAT TCGTATTCCC GCAAGCCCGT GGCCTGGCCG CGTATGCAGG CCGCCGCGCA GGCCGACCCG AAAGCCCCCG CTGCCGTGCT GTTGGGCGTG CAATGGATCA ACCCGCTGAT GTGGCGGGAC TACCCCACCC AATGGAACTT ACTTTGGGCG CAGGGCCTGG CCCAGCCCAA CGCCAATGAT CGCGATGCAG CAAGATTCAA GCTTGGGGAT GCGGTAGGGG AATTAACGCT CGGGCTAGAG CGCAAGAAGC GTCTAGATGA CTACCCGCAG ATCAAGCGCG ACAGGTTCTG GGGAGCCTAT AGCAAGCTGT TGAGTGTTCC TCTAAGCACT TTCAGTTATC GCTACTTCAA CTCGGGTTTC TACTCGATGG AGCAGGGTAC CGACCGGCCC GACTTCATGG ATGCCATCGT GTTCGCGGGT ATGCCGCGCG AGTGGATCGG TACGCCCACG TACCTGAAGA ACTATGCCCT TGGCGATGAT TGGAGCGTGG ATGAACTGCT GAAAGAGCAG GCCGCCATGG GCATGCCCGC GCCCAGCTAT CTGGCCTACG ACGCCGCACA TGCCGAGCAA CGCATGCAGG ACTACTGGGT CAAGCTGCAC AAAGACCCGA AGACCGGCGA AACCGTGCGC GGCCTGCGTA CTCGTGAACC AATGATCGTT GGCGAGTCCA TTCTGTCGTT GCAAGGTGCA CGGAGACTGA TGTTCGACAA GGTGGCCGAT GCCGCCTTCG CCAAAAGCAT GAAGTACAAC CCCAGCGGCA AGCTGCCACA GGTGGTGCTC AAGGCTGGCG ACGAGACCGT GGGCTTCTAC GATCTGCAAG AGGCGCTCAA ATTCCTGGCC GATAACCCCA ACAAGCTGGT GTGGGTGTGG AACATGGATG CGCCCAACTA CCCGATGGGC GAGCAGACCA ACGAAAACAC CGCCCTCCTC ATCCTCGGCC ACCCCAGCGC CAACTGGGGC TACGCGCCGC TCGCGTCCAT CTACACGCCG CAGCATCACG AAGGCGGCAT CGGCGCCAAG GCCGCCAACC CGGGTGGCGC ATGGACGCCT CTGATGAAGA CGCTGCGAGA ACAGGCCTCG CAGGATCACC CGGTCGAACG TGTCTATCAC GACGTGCACA AGCACACCGC CAACATCAAC GCCCTGATGG GCCCACTGCA CGCCGCCGTC CACCAGCAAT GGCCCGACCT GGATCAAGTT GGCAACTTCT ACAGCGTGTC CCAAGTCATG GAGGGTCCGG CCCGCGCCGC TAGCTTCGCG GTCAACGCCG CCTTTGCCGC TGCCTACGCC AACCAAAGTG GCAAGAGCGC CGTCGTCACC AGCGTGGCCG ATGCCAAAGA CAGCTGGGCG GTACTGATCG GCCCCCCGCC GGGCTGGCAG CCGACGCCGC CAATCACGCA ATGGGACCGT GCGCGGGGTG AGGGCCGTGC GTACTGGCCG TGGTTTGGCA AACAAACGGG TGACCGAAAA TCCTGA
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Protein sequence | MPNLSCLSPC RRALKATRVL AAACLLLTVS YSGVSMSAND SYSRKPVAWP RMQAAAQADP KAPAAVLLGV QWINPLMWRD YPTQWNLLWA QGLAQPNAND RDAARFKLGD AVGELTLGLE RKKRLDDYPQ IKRDRFWGAY SKLLSVPLST FSYRYFNSGF YSMEQGTDRP DFMDAIVFAG MPREWIGTPT YLKNYALGDD WSVDELLKEQ AAMGMPAPSY LAYDAAHAEQ RMQDYWVKLH KDPKTGETVR GLRTREPMIV GESILSLQGA RRLMFDKVAD AAFAKSMKYN PSGKLPQVVL KAGDETVGFY DLQEALKFLA DNPNKLVWVW NMDAPNYPMG EQTNENTALL ILGHPSANWG YAPLASIYTP QHHEGGIGAK AANPGGAWTP LMKTLREQAS QDHPVERVYH DVHKHTANIN ALMGPLHAAV HQQWPDLDQV GNFYSVSQVM EGPARAASFA VNAAFAAAYA NQSGKSAVVT SVADAKDSWA VLIGPPPGWQ PTPPITQWDR ARGEGRAYWP WFGKQTGDRK S
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