| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2252 |
|---|
| Symbol | |
|---|
| ID | 6287446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2364192 |
|---|
| End bp | 2365787 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625824 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001899818 |
|---|
| Protein GI | 187929331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.632916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACT TGTCTTGTTT GAGCCCATGC AGGCGCGCGC TGAAGGCCAC GCGCGTGCTG
GCCGCCGCCT GCCTGCTGTT GACCGTTAGT TATTCTGGAG TGTCGATGTC CGCCAACGAT
TCGTATTCCC GCAAGCCCGT GGCCTGGCCG CGTATGCAGG CCGCCGCGCA GGCCGACCCG
AAAGCCCCCG CTGCCGTGCT GTTGGGCGTG CAATGGATCA ACCCGCTGAT GTGGCGGGAC
TACCCCACCC AATGGAACTT ACTTTGGGCG CAGGGCCTGG CCCAGCCCAA CGCCAATGAT
CGCGATGCAG CAAGATTCAA GCTTGGGGAT GCGGTAGGGG AATTAACGCT CGGGCTAGAG
CGCAAGAAGC GTCTAGATGA CTACCCGCAG ATCAAGCGCG ACAGGTTCTG GGGAGCCTAT
AGCAAGCTGT TGAGTGTTCC TCTGAGCACT TTCAGTTATC GCTACTTCAA CTCGGGTTTC
TACTCGATGG AGCAGGGTAC CGACCGGCCC GACTTCATGG ATGCCATCGT GTTCGCGGGT
ATGCCGCGCG AGTGGATCGG TACGCCCACG TACCTGAAGA ACTATGCCCT TGGCGATGAT
TGGAGCGTGG ATGAACTGCT GAAAGAGCAG GCCGCCATGG GCATGCCCGC GCCCAGCTAT
CTGGCCTACG ACGCCGCACA TTCCGAGCAA CGCATGCAGG ACTACTGGGT CAAGCTGCAC
AAAGACCCGA AGACCGGCGA AACCGTGCGC GGCCTGCGTA CTCGTGAACC AATGATCGTT
GGCGAGTCCA TTCTGTCGTT GCAAGGTGCA CGGAGACTGA TGTTCGACAA GGTGGCCGAT
GCCGCCTTCG CCAAAAGCAT GAAGTACAAC CCCAGCGGCA AGCTGCCACA GGTGGTGCTC
AAGGCTGGCG ACGAGACCGT GGGCTTCTAC GATCTGCAAG AGGCGCTCAA ATTCCTGGCC
GATAACCCCA ACAAGCTGGT GTGGGTGTGG AACATGGATG CGCCCAACTA CCCGATGGGC
GAGCAGACCA ACGAAAACAC CGCCCTCCTC ATCCTCGGCC ACCCCAGCGC CAACTGGGGC
TACGCGCCGC TCGCGTCCAT CTACACGCCG CAGCATCACG AAGGCGGCAT CGGCGCCAAG
GCCGCCAACC CGGGTGGCCC GTGGAGCCCG TTGATGAAGA CGCTGCAAGA ACAGGCCTCC
CAGGATCACC CGGTCGAACG TGTCTACCAC GACGTGCACA AGCACACCAC CAACGTGAAT
GCCTTGATGG GGCCGCTGCA CGCCGCCGTC CACCAGCAAT GGCCGGATCT GGACCAAATC
GGCAATTTCT ACAGCGTGTC CCAAGTCATG GAAGGCCCGG TGCGTGCCGC CAGCTTCGCG
GTCAACGCCG CGTTTGCCGC TGCCTACGCC AACCAAAGCG GCAAGAGTGC CGTCGTCACC
AGCGTGGCCG ATGCCAAAGA CAGCTGGGCG GTACTGATCG GCCCCCCGCC GGGCTGGCAG
CCGACGCCGC CAATTACGAA ATGGGACCGT GCGCGGGGTG AGGGCCGTGC GTACTGGCCG
TGGTTTGGCA AACAAACGGG TGACCGAAAA TCCTGA
|
|---|
| Protein sequence | MPNLSCLSPC RRALKATRVL AAACLLLTVS YSGVSMSAND SYSRKPVAWP RMQAAAQADP
KAPAAVLLGV QWINPLMWRD YPTQWNLLWA QGLAQPNAND RDAARFKLGD AVGELTLGLE
RKKRLDDYPQ IKRDRFWGAY SKLLSVPLST FSYRYFNSGF YSMEQGTDRP DFMDAIVFAG
MPREWIGTPT YLKNYALGDD WSVDELLKEQ AAMGMPAPSY LAYDAAHSEQ RMQDYWVKLH
KDPKTGETVR GLRTREPMIV GESILSLQGA RRLMFDKVAD AAFAKSMKYN PSGKLPQVVL
KAGDETVGFY DLQEALKFLA DNPNKLVWVW NMDAPNYPMG EQTNENTALL ILGHPSANWG
YAPLASIYTP QHHEGGIGAK AANPGGPWSP LMKTLQEQAS QDHPVERVYH DVHKHTTNVN
ALMGPLHAAV HQQWPDLDQI GNFYSVSQVM EGPVRAASFA VNAAFAAAYA NQSGKSAVVT
SVADAKDSWA VLIGPPPGWQ PTPPITKWDR ARGEGRAYWP WFGKQTGDRK S
|
|---|
| |