17 homologs were found in PanDaTox collection
for query gene Rpal_1002 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1002  hypothetical protein  100 
 
 
181 aa  358  3e-98  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4477  hypothetical protein  93.92 
 
 
181 aa  316  1e-85  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.320227  normal 
 
 
-
 
NC_007958  RPD_4327  hypothetical protein  92.27 
 
 
185 aa  307  6.999999999999999e-83  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.457545  normal 
 
 
-
 
NC_007925  RPC_4780  hypothetical protein  83.43 
 
 
180 aa  278  2e-74  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.472606  normal 
 
 
-
 
NC_004311  BRA0291  hypothetical protein  41.42 
 
 
174 aa  118  4.9999999999999996e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0267  hypothetical protein  41.42 
 
 
174 aa  118  4.9999999999999996e-26  Brucella ovis ATCC 25840  Bacteria  normal  0.708651  n/a   
 
 
-
 
NC_009668  Oant_3117  hypothetical protein  40.51 
 
 
169 aa  115  3e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0466  hypothetical protein  43.57 
 
 
174 aa  109  2.0000000000000002e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.978743  n/a   
 
 
-
 
NC_009428  Rsph17025_2387  putative lipid carrier protein-like protein  43.57 
 
 
174 aa  109  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0557516 
 
 
-
 
NC_009049  Rsph17029_2118  hypothetical protein  43.57 
 
 
174 aa  109  2.0000000000000002e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.130953  normal  0.854449 
 
 
-
 
NC_009621  Smed_6297  hypothetical protein  39.16 
 
 
168 aa  108  4.0000000000000004e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009469  Acry_3474  hypothetical protein  40.41 
 
 
223 aa  97.8  8e-20  Acidiphilium cryptum JF-5  Bacteria  normal  0.498948  n/a   
 
 
-
 
NC_010338  Caul_3004  putative lipid carrier protein-like protein  49.11 
 
 
179 aa  97.4  1e-19  Caulobacter sp. K31  Bacteria  normal  0.195226  normal 
 
 
-
 
NC_008687  Pden_4227  hypothetical protein  40.74 
 
 
177 aa  86.3  2e-16  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2400  putative lipid carrier protein-like protein  35.56 
 
 
190 aa  82.4  0.000000000000003  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008242  Meso_4295  putative lipid carrier protein-like  44.44 
 
 
183 aa  72  0.000000000004  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3493  putative lipid carrier protein-like protein  27.33 
 
 
227 aa  59.7  0.00000002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
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