Gene Smed_6297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6297 
Symbol 
ID5320599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1214464 
End bp1214970 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID640777896 
Producthypothetical protein 
Protein accessionYP_001314828 
Protein GI150378233 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCC CGCGCCCGCT GGCCGCACCG CTTGCCGTCG TGCCGATCGC TTTGATCGAG 
GGGGCGGTGA AGCTCATGTT CAAAAGCCTG CTCAACAGGC ATCCGGCGCT CTTCGACCGC
CTCGGGGAGC ACAGGGGGAA GCGCTACGCC TTTTGTCCGC TCGACCTGCC GCTCGTCTTC
GTGGTGGAGC CGTCGCGCGC GGCGGTGTCG GTAACGCGCA AGCGGGCCGC TGCTGCCGCA
GATGCTGTCG TGGAGGGTCC GCTGTTCCTG CTCCTCACGC TTCTCGAGGG CCGCTGCGAC
GCGGACGCCC TCTTCTTCTC GCGGTCGCTG ACGGTGACCG GCGACATGGA GGCAATGCTG
GCGCTGCGCA ATGCGCTCGA CGGCTGCGAG GTCGACCTGC CGCGCGACCT CGGCGCTTCC
GCCGGGCCGC TCTCGCCGCT CGTCAGCCGA ACCGCAGACG CGATCCGCCG CCGCGCACTC
GCCGGGGAGA ATGCCGCATG GAACTGA
 
Protein sequence
MEFPRPLAAP LAVVPIALIE GAVKLMFKSL LNRHPALFDR LGEHRGKRYA FCPLDLPLVF 
VVEPSRAAVS VTRKRAAAAA DAVVEGPLFL LLTLLEGRCD ADALFFSRSL TVTGDMEAML
ALRNALDGCE VDLPRDLGAS AGPLSPLVSR TADAIRRRAL AGENAAWN