13 homologs were found in PanDaTox collection
for query gene RoseRS_4035 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_4035    100 
 
 
135 bp  268  2.9999999999999995e-70  Roseiflexus sp. RS-1  Bacteria  normal  0.0627552  normal 
 
 
-
 
NC_009523  RoseRS_0241  transposase, IS4 family protein  90.74 
 
 
826 bp  67.9  0.0000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.458028  normal  0.0118803 
 
 
-
 
NC_009523  RoseRS_1437    90.74 
 
 
808 bp  67.9  0.0000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0303465 
 
 
-
 
NC_009523  RoseRS_1764  transposase, IS4 family protein  90.74 
 
 
826 bp  67.9  0.0000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.456198 
 
 
-
 
NC_009523  RoseRS_1808  transposase, IS4 family protein  90.74 
 
 
826 bp  67.9  0.0000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.20953  normal  0.0264581 
 
 
-
 
NC_009523  RoseRS_3561  transposase, IS4 family protein  90.57 
 
 
826 bp  65.9  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.428349  normal 
 
 
-
 
NC_009523  RoseRS_3690  transposase, IS4 family protein  90.57 
 
 
825 bp  65.9  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.241824  normal  0.0110371 
 
 
-
 
NC_009523  RoseRS_2130  transposase, IS4 family protein  93.02 
 
 
826 bp  61.9  0.00000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2629    84.21 
 
 
823 bp  56  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0636    90.7 
 
 
135 bp  54  0.000009  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00239894  normal  0.243236 
 
 
-
 
NC_009523  RoseRS_1382  transposase, IS4 family protein  90.48 
 
 
814 bp  52  0.00004  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00156039  hitchhiker  0.00320613 
 
 
-
 
NC_009523  RoseRS_3422  transposase, IS4 family protein  90.48 
 
 
826 bp  52  0.00004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0574466 
 
 
-
 
NC_009523  RoseRS_4423    91.67 
 
 
818 bp  48.1  0.0006  Roseiflexus sp. RS-1  Bacteria  normal  0.227705  normal  0.282412 
 
 
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