More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5837 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5837  acyl-CoA dehydrogenase-like protein  100 
 
 
400 aa  811    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5361  putative acyl-CoA dehydrogenase  74.94 
 
 
402 aa  605  9.999999999999999e-173  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1718  acyl-CoA dehydrogenase domain protein  60.16 
 
 
428 aa  467  9.999999999999999e-131  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2526  putative acyl-CoA dehydrogenase  61.1 
 
 
425 aa  461  1e-129  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0280993 
 
 
-
 
NC_007651  BTH_I0531  acyl-CoA dehydrogenase domain-containing protein  57.73 
 
 
407 aa  427  1e-118  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0818  acyl-CoA dehydrogenase domain-containing protein  58.29 
 
 
407 aa  422  1e-117  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0655  acyl-CoA dehydrogenase domain-containing protein  58.29 
 
 
407 aa  422  1e-117  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0641  acyl-CoA dehydrogenase domain-containing protein  58.29 
 
 
407 aa  422  1e-117  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2197  acyl-CoA dehydrogenase domain-containing protein  58.01 
 
 
407 aa  419  1e-116  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2888  acyl-CoA dehydrogenase domain-containing protein  58.01 
 
 
407 aa  419  1e-116  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0042  acyl-CoA dehydrogenase domain-containing protein  58.01 
 
 
407 aa  419  1e-116  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3304  acyl-CoA dehydrogenase type 2  58.08 
 
 
398 aa  420  1e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.890764  normal 
 
 
-
 
NC_007511  Bcep18194_B1805  Acyl-CoA dehydrogenase-like  57.78 
 
 
398 aa  421  1e-116  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_009080  BMA10247_2510  acyl-CoA dehydrogenase domain-containing protein  58.01 
 
 
407 aa  419  1e-116  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10491  n/a   
 
 
-
 
NC_008061  Bcen_4153  Acyl-CoA dehydrogenase, type 2-like  58.08 
 
 
398 aa  420  1e-116  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.240401  n/a   
 
 
-
 
NC_008543  Bcen2424_4213  acyl-CoA dehydrogenase type 2  58.08 
 
 
398 aa  420  1e-116  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.353379 
 
 
-
 
NC_010086  Bmul_4392  acyl-CoA dehydrogenase domain-containing protein  58.01 
 
 
398 aa  417  9.999999999999999e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3636  acyl-CoA dehydrogenase type 2  57.66 
 
 
398 aa  416  9.999999999999999e-116  Burkholderia ambifaria AMMD  Bacteria  normal  0.556701  normal 
 
 
-
 
NC_010552  BamMC406_4110  acyl-CoA dehydrogenase type 2  57.1 
 
 
398 aa  413  1e-114  Burkholderia ambifaria MC40-6  Bacteria  normal  0.163636  normal 
 
 
-
 
NC_011369  Rleg2_3795  acyl-CoA dehydrogenase domain protein  49.87 
 
 
393 aa  375  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00013086  normal  0.344818 
 
 
-
 
NC_012850  Rleg_4124  acyl-CoA dehydrogenase domain protein  50.13 
 
 
393 aa  377  1e-103  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.993047 
 
 
-
 
NC_010505  Mrad2831_0185  acyl-CoA dehydrogenase domain-containing protein  51.68 
 
 
387 aa  367  1e-100  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1476  acyl-CoA dehydrogenase protein  49.32 
 
 
390 aa  368  1e-100  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_6022  acyl-CoA dehydrogenase  48.07 
 
 
399 aa  357  1.9999999999999998e-97  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4418  acyl-CoA dehydrogenase domain protein  52.12 
 
 
402 aa  349  4e-95  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.584473  n/a   
 
 
-
 
NC_010511  M446_3403  acyl-CoA dehydrogenase type 2  51.85 
 
 
409 aa  343  4e-93  Methylobacterium sp. 4-46  Bacteria  normal  0.0408106  normal  0.104533 
 
 
-
 
NC_010172  Mext_4597  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
400 aa  336  3.9999999999999995e-91  Methylobacterium extorquens PA1  Bacteria  normal  0.419077  normal  0.111113 
 
 
-
 
NC_011757  Mchl_5058  acyl-CoA dehydrogenase domain protein  50 
 
 
400 aa  333  4e-90  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_007958  RPD_1095  acyl-CoA dehydrogenase-like  47.61 
 
 
408 aa  328  1.0000000000000001e-88  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0166  putative carnitine operon oxidoreductase  44.41 
 
 
395 aa  326  3e-88  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5079  Acyl-CoA dehydrogenase type 2 domain  48.48 
 
 
409 aa  312  7.999999999999999e-84  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0992  Acyl-CoA dehydrogenase-like  45.68 
 
 
408 aa  301  1e-80  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.297365 
 
 
-
 
NC_013441  Gbro_1077  acyl-CoA dehydrogenase domain protein  42.02 
 
 
385 aa  255  1.0000000000000001e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3056  acyl-CoA dehydrogenase domain-containing protein  33.79 
 
 
390 aa  158  2e-37  Salinispora arenicola CNS-205  Bacteria  normal  0.432663  hitchhiker  0.00291671 
 
 
-
 
NC_009380  Strop_0683  acyl-CoA dehydrogenase type 2  33.42 
 
 
385 aa  146  7.0000000000000006e-34  Salinispora tropica CNB-440  Bacteria  normal  0.998366  normal 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  24.73 
 
 
371 aa  91.7  2e-17  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  33.18 
 
 
389 aa  90.1  6e-17  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  35.56 
 
 
387 aa  85.9  0.000000000000001  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  34.36 
 
 
387 aa  83.6  0.000000000000006  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  31.79 
 
 
382 aa  82  0.00000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  28.19 
 
 
416 aa  81.6  0.00000000000002  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  26.74 
 
 
378 aa  81.3  0.00000000000003  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  25.91 
 
 
380 aa  80.1  0.00000000000007  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  27.62 
 
 
384 aa  79.3  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  26.94 
 
 
384 aa  73.2  0.000000000008  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  27.49 
 
 
396 aa  73.2  0.000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  27.08 
 
 
392 aa  72.4  0.00000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009714  CHAB381_1168  putative acyl-coa dehydrogenase  26.11 
 
 
372 aa  72  0.00000000002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4334  acyl-CoA dehydrogenase type 2  26.38 
 
 
409 aa  70.5  0.00000000005  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  26.94 
 
 
388 aa  68.9  0.0000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  25.98 
 
 
393 aa  68.6  0.0000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_007509  Bcep18194_C7715  Acyl-CoA dehydrogenase-like  26.69 
 
 
448 aa  68.9  0.0000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  24.05 
 
 
380 aa  68.6  0.0000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  33.91 
 
 
383 aa  67.4  0.0000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  24.51 
 
 
390 aa  66.6  0.0000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  28.12 
 
 
442 aa  66.2  0.0000000009  Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  22.92 
 
 
380 aa  65.5  0.000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_3970  acyl-CoA dehydrogenase domain-containing protein  28.28 
 
 
376 aa  65.9  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.493916  n/a   
 
 
-
 
NC_008726  Mvan_5885  acyl-CoA dehydrogenase domain-containing protein  28.42 
 
 
375 aa  66.2  0.000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.468713 
 
 
-
 
NC_009092  Shew_2570  acyl-CoA dehydrogenase domain-containing protein  30.62 
 
 
389 aa  65.9  0.000000001  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0930  acyl-CoA dehydrogenase domain-containing protein  27.71 
 
 
404 aa  65.1  0.000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0316102  n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  23.91 
 
 
381 aa  65.1  0.000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2255  acyl-CoA dehydrogenase domain-containing protein  27.71 
 
 
400 aa  65.1  0.000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  23.91 
 
 
381 aa  65.1  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_009511  Swit_1842  acyl-CoA dehydrogenase domain-containing protein  28.23 
 
 
387 aa  64.7  0.000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.982054  normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  22.67 
 
 
380 aa  64.3  0.000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1903  Acyl-CoA dehydrogenase type 2 domain protein  27.61 
 
 
417 aa  64.7  0.000000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  27.73 
 
 
440 aa  63.9  0.000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_009485  BBta_4293  putative Acyl-CoA dehydrogenase  25.21 
 
 
398 aa  63.9  0.000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.004124 
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  23.91 
 
 
381 aa  63.2  0.000000007  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  24.36 
 
 
381 aa  63.2  0.000000008  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  24.36 
 
 
381 aa  63.2  0.000000008  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  24.36 
 
 
381 aa  63.2  0.000000008  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_013172  Bfae_11010  acyl-CoA dehydrogenase  30.31 
 
 
399 aa  63.2  0.000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  23.62 
 
 
381 aa  63.2  0.000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0353  Acyl-CoA dehydrogenase, C-terminal  27.92 
 
 
401 aa  63.2  0.000000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.758482 
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  24.36 
 
 
381 aa  63.2  0.000000009  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  24.36 
 
 
381 aa  63.2  0.000000009  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1147  acyl-CoA dehydrogenase domain-containing protein  27.43 
 
 
400 aa  62.4  0.00000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1521  acyl-CoA dehydrogenase domain-containing protein  27.43 
 
 
404 aa  62.4  0.00000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.954011  n/a   
 
 
-
 
NC_009565  TBFG_11696  acyl-CoA dehydrogenase fadE16  25 
 
 
373 aa  62.8  0.00000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.392207 
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  23.91 
 
 
381 aa  62.4  0.00000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0092  acyl-CoA dehydrogenase domain-containing protein  27.43 
 
 
404 aa  62.4  0.00000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.362932  n/a   
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  29.03 
 
 
425 aa  61.6  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_009075  BURPS668_A1015  acyl-CoA dehydrogenase domain-containing protein  28.4 
 
 
404 aa  61.6  0.00000002  Burkholderia pseudomallei 668  Bacteria  normal  0.0155117  n/a   
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  27.07 
 
 
390 aa  62  0.00000002  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_012560  Avin_31350  DszC-like desulfurization enzyme  25.88 
 
 
392 aa  62  0.00000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  26.65 
 
 
396 aa  61.2  0.00000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  23.72 
 
 
387 aa  61.2  0.00000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  27.58 
 
 
454 aa  60.1  0.00000006  Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  26.72 
 
 
375 aa  60.5  0.00000006  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_004578  PSPTO_5185  acyl-CoA dehydrogenase family protein  28.23 
 
 
401 aa  60.1  0.00000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3306  Acyl-CoA dehydrogenase-like  27.81 
 
 
380 aa  59.7  0.00000008  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  26.72 
 
 
375 aa  60.1  0.00000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  26.63 
 
 
397 aa  59.3  0.0000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4395  acyl-CoA dehydrogenase type 2  30 
 
 
434 aa  59.3  0.0000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  22.32 
 
 
382 aa  58.9  0.0000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  25.07 
 
 
382 aa  58.5  0.0000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_007333  Tfu_1234  putative hydrolase  28.42 
 
 
370 aa  58.5  0.0000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  22.16 
 
 
382 aa  58.5  0.0000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
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