19 homologs were found in PanDaTox collection
for query gene Rmet_2667 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007973  Rmet_2667  McrBC 5-methylcytosine restriction system component-like protein  100 
 
 		 424 aa  859    Cupriavidus metallidurans CH34  Bacteria  normal  0.0475891  normal  0.959156 
 
 
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NC_007958  RPD_1974  hypothetical protein  29.37 
 
 		 434 aa  139  7e-32  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00010435  normal  0.369682 
 
 
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NC_013730  Slin_2471  5-methylcytosine restriction system component- like protein  22.56 
 
 		 428 aa  61.2  0.00000003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.248512 
 
 
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NC_011769  DvMF_0230  McrBC 5-methylcytosine restriction system component-like protein  26.55 
 
 		 397 aa  56.6  0.0000007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.012519 
 
 
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NC_011757  Mchl_3309  IQ calmodulin-binding- domain protein  26.6 
 
 		 426 aa  55.5  0.000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
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NC_014150  Bmur_1561  5-methylcytosine restriction system component- like protein  20.85 
 
 		 451 aa  54.3  0.000004  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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NC_003912  CJE0135  hypothetical protein  21.45 
 
 		 443 aa  53.9  0.000006  Campylobacter jejuni RM1221  Bacteria  normal  0.0584774  n/a   
 
 
-
 
NC_009637  MmarC7_0003  hypothetical protein  19.61 
 
 		 416 aa  50.8  0.00004  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00559809  unclonable  0.0000000111615 
 
 
-
 
NC_010159  YpAngola_A1240  hypothetical protein  21.82 
 
 		 438 aa  50.1  0.00007  Yersinia pestis Angola  Bacteria  normal  0.0689849  hitchhiker  0.000177876 
 
 
-
 
NC_008787  CJJ81176_0176  hypothetical protein  21.72 
 
 		 288 aa  49.7  0.0001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  1  n/a   
 
 
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NC_009707  JJD26997_0154  hypothetical protein  22.08 
 
 		 445 aa  49.7  0.0001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.899736  n/a   
 
 
-
 
NC_013158  Huta_1703  McrBC 5-methylcytosine restriction system component-like protein  24.86 
 
 		 421 aa  47.8  0.0003  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_008312  Tery_3582  McrBC 5-methylcytosine restriction system component-like  23.85 
 
 		 405 aa  47  0.0006  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_1654  hypothetical protein  21.78 
 
 		 424 aa  47  0.0006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.159244  n/a   
 
 
-
 
NC_010424  Daud_0401  McrBC 5-methylcytosine restriction system component-like protein  23.8 
 
 		 435 aa  46.6  0.0007  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.204424  n/a   
 
 
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NC_013132  Cpin_3470  McrBC 5-methylcytosine restriction system component-like protein  21.1 
 
 		 423 aa  46.6  0.001  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00801853  normal  0.511219 
 
 
-
 
NC_007509  Bcep18194_C7439  McrBC 5-methylcytosine restriction system component-like  21.92 
 
 		 445 aa  44.7  0.003  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_2661  hypothetical protein  20.28 
 
 		 429 aa  44.3  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.706395 
 
 
-
 
NC_007794  Saro_0350  McrBC 5-methylcytosine restriction system component-like  27.27 
 
 		 687 aa  43.5  0.008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
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