| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2667 |
|---|
| Symbol | |
|---|
| ID | 4039491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2900852 |
|---|
| End bp | 2902126 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637978064 |
|---|
| Product | McrBC 5-methylcytosine restriction system component-like protein |
|---|
| Protein accession | YP_584809 |
|---|
| Protein GI | 94311599 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4268] McrBC 5-methylcytosine restriction system component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0475891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.959156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG TTACTACTTT AATCGTTAAG GAATACGAGA CCATCGATAT TCCGGCTGCG
CTGATCATTG ATGGAATTGC TCTCCGCATC TATCCGGCCG TATTGGAGAG GGATTACATC
AGTGTGCGAT GGAAGAAAGG TGTTCCGATC TTCCAGGCAG GTGGATATAT CGGTGTTATC
CCCATTAACG ATCAGTTGAC CTTGGATGTT CGACCAAAGG TTCCGCTGGT CAATTTGGAA
AGAATTCTAT ATTCATCGAA TCATAAGCCC TATGTGCTGG AGTCATTTCA GCGGGCCTAT
GGTCACCACA CGAGGGCTTC CGAGCCTATT GAAACTTTTC TGGTGGATCG GTTTCTCGAT
TGGGTTGAGG AGATTCATCG ATTCGGCTTG TTAAAGCAGT ATCGTGTAAT ACATGAAGAT
GGCTTCACCC CGCGTGGACG ATTGAATTTC GCGGCTACGA TTCGTTTGCG AAGCAGGAAT
CAGCAGTCAC TAGCATACCA GTGGGACGAC CGGACGGCCG ATAACGGTCC TAACCGTTTT
ATCAAGGCTG TGTTATTGCA GCTAGCGGAC CGTGATGAAT TCTTGCATGA TAGAAGAAGA
AAGGCAAGGC TGTCAGTTTG TGTTGATTAT TTTTCCTCTG TGTCTGATGT CGATGTTCAC
TCTGTGTTGA TCGATCCCTT GGTGGATGAT GTTGAGCAAT TGCCGTCTAC TCGGGAATAT
TATAAGACCG CAATTGTGTT GGCAAAGATG CTAATAGAAA AGAGTGGGTT GGCTTTTCTT
TCCGACCAAC ACTCTGTTTT GCTTCCAACT TTGCTTCTCG ACTTGGACGA GGCTTTCGAG
AAATATGTGC TAACGCTGCT GCAACAAGTC AACATAAGGC GAGACGACGT TCGCGTATTT
GATGGAAATA TCGATGGTGC CTTGGGTGGT AAGAAGCAAT TGCTGAAAGA CAGTGGCCTC
GAAAATCAAG TAAAAAGTAC GGTTCAGGCT ACCCCAGATG TTCTTGTGGA GAAGTATTCA
ATACCCTCCA TCCCGAGAAA TCTAGTCATC GATATGAAAT ACAAGGAAGT GAAGAATATC
GTTGAGCGGG GAGACCTTAA TCAGGTCATC GCATATGCAG CATCATATCA ATCAGCAGCT
GCAGTATTTA TCCTGCCTTC CAGAGGGCCA CAACAGCGAG GGCTGCAGTG CCTTGGTACC
GTCGCTGAGA TTCCAATTTT CAATATTTTA TTAATCTCGG CACTCCCGAT ATTGAGACAG
AAGAGGAAGC CCTAG
|
|---|
| Protein sequence | MSSVTTLIVK EYETIDIPAA LIIDGIALRI YPAVLERDYI SVRWKKGVPI FQAGGYIGVI
PINDQLTLDV RPKVPLVNLE RILYSSNHKP YVLESFQRAY GHHTRASEPI ETFLVDRFLD
WVEEIHRFGL LKQYRVIHED GFTPRGRLNF AATIRLRSRN QQSLAYQWDD RTADNGPNRF
IKAVLLQLAD RDEFLHDRRR KARLSVCVDY FSSVSDVDVH SVLIDPLVDD VEQLPSTREY
YKTAIVLAKM LIEKSGLAFL SDQHSVLLPT LLLDLDEAFE KYVLTLLQQV NIRRDDVRVF
DGNIDGALGG KKQLLKDSGL ENQVKSTVQA TPDVLVEKYS IPSIPRNLVI DMKYKEVKNI
VERGDLNQVI AYAASYQSAA AVFILPSRGP QQRGLQCLGT VAEIPIFNIL LISALPILRQ
KRKP
|
|---|
| |