10 homologs were found in PanDaTox collection
for query gene Rleg_5440 on replicon NC_012853
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012853  Rleg_5440  hypothetical protein  100 
 
 
135 aa  251  2.0000000000000002e-66  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.983092  hitchhiker  0.0031733 
 
 
-
 
NC_011370  Rleg2_6142  hypothetical protein  84.44 
 
 
224 aa  185  2e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.551083  normal  0.349913 
 
 
-
 
NC_012853  Rleg_5545  hypothetical protein  60.45 
 
 
189 aa  125  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000151722 
 
 
-
 
NC_012848  Rleg_4899  hypothetical protein  64.18 
 
 
220 aa  124  6e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.338147  normal 
 
 
-
 
NC_012852  Rleg_6024  hypothetical protein  66.67 
 
 
220 aa  117  4.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5675  transposase IS3/IS911 family protein  40.24 
 
 
151 aa  71.2  0.000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.065322  normal 
 
 
-
 
NC_009670  Oant_4730  putative SyrB-like regulator  64.71 
 
 
144 aa  65.1  0.0000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6244  transposase IS3/IS911 family protein  68.18 
 
 
151 aa  63.2  0.000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.286208  normal 
 
 
-
 
NC_004311  BRA0141  SyrB family protein, putative  53.33 
 
 
145 aa  50.8  0.000007  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4606  SyrB2 regulator  43.06 
 
 
143 aa  48.1  0.00004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.378272 
 
 
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