Gene Smed_5675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5675 
Symbol 
ID5319977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp641822 
End bp642277 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content58% 
IMG OID640777405 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314337 
Protein GI150377742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.065322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG AGAGTAATAC GGGACCAGTT GCTGCGGCTG TAGTGACGGA CACAGAGATG 
AAACCATCAA CGACTAAGAA GCGGAGGTCG CCACGGCCTC AGAAGGCGTC TGCCGAACCA
GCTCAAGCAA AGACGCCCGC CGCTAAACGC AGGGGGTATA CCGAGCAAGA AAAGAGCGAG
AAGCTCAAGC AGATCGAGAC ACAAGTCAGC GAAGGCAGCA CCCTAAAGGA TGCCATCAAG
AGCGCCGGCA TATCAGAGCA AACCTACTAT CATTGGAAAA GTGCTGCGAA GCCTGGCGAG
CAAAAGGGCA CCAAGGACCC TGGGCCCCTC CCGGCCGGCG ATGACCTGGC AGCTCTTGTA
GAGCTCGAAG AGGAAAACCA GAGGCTCCGC AAGCTGCTGG CGGAGAAGCT GCGTGCGGAA
AATGCCGAGC TGCGCAAGAG GCTCGGTCTG GACTAA
 
Protein sequence
MADESNTGPV AAAVVTDTEM KPSTTKKRRS PRPQKASAEP AQAKTPAAKR RGYTEQEKSE 
KLKQIETQVS EGSTLKDAIK SAGISEQTYY HWKSAAKPGE QKGTKDPGPL PAGDDLAALV
ELEEENQRLR KLLAEKLRAE NAELRKRLGL D