Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5675 |
Symbol | |
ID | 5319977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 641822 |
End bp | 642277 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640777405 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001314337 |
Protein GI | 150377742 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.065322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG AGAGTAATAC GGGACCAGTT GCTGCGGCTG TAGTGACGGA CACAGAGATG AAACCATCAA CGACTAAGAA GCGGAGGTCG CCACGGCCTC AGAAGGCGTC TGCCGAACCA GCTCAAGCAA AGACGCCCGC CGCTAAACGC AGGGGGTATA CCGAGCAAGA AAAGAGCGAG AAGCTCAAGC AGATCGAGAC ACAAGTCAGC GAAGGCAGCA CCCTAAAGGA TGCCATCAAG AGCGCCGGCA TATCAGAGCA AACCTACTAT CATTGGAAAA GTGCTGCGAA GCCTGGCGAG CAAAAGGGCA CCAAGGACCC TGGGCCCCTC CCGGCCGGCG ATGACCTGGC AGCTCTTGTA GAGCTCGAAG AGGAAAACCA GAGGCTCCGC AAGCTGCTGG CGGAGAAGCT GCGTGCGGAA AATGCCGAGC TGCGCAAGAG GCTCGGTCTG GACTAA
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Protein sequence | MADESNTGPV AAAVVTDTEM KPSTTKKRRS PRPQKASAEP AQAKTPAAKR RGYTEQEKSE KLKQIETQVS EGSTLKDAIK SAGISEQTYY HWKSAAKPGE QKGTKDPGPL PAGDDLAALV ELEEENQRLR KLLAEKLRAE NAELRKRLGL D
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