Gene Smed_6244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6244 
Symbol 
ID5320546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1164395 
End bp1164850 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content55% 
IMG OID640777844 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314776 
Protein GI150378181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.286208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACG AAAGTAATGC AGGGCCAGTT GCTCCGGCTG TAGTGGCGGA TGCAGAAGTG 
AAAGCACCCA CGGGTAAGAA GCGGAGCTCG TCACGGCCCC AGAAGGCGCC CCCCGAACCA
GCTCAACCAA AGATGCCGGC CGCTAAACGC AGGGGATATA GCGAGCAAGA GAGGAGCGAG
AAGCTCAGGC TGATTGAGAC AAAAGTCAGC GAAGGCAATA TCCTCAAGGA CGCTATCAAG
AGCGCCGGTA TATCAGAGCA AACCTACTAT CATTGGAAAG GTGCTGCTAA GTCAGCCGCG
CGAAAGGACA TTGAGGGAAC TAGCCCCTTA TGGGCTGCCG ATGAGTTTGC AGAGCTTGTC
CGGCTTGAAG AGGAAAATCA GAGGCTCCGC AAGCAACTGG CGGAGAAGCT GCGAACGGAA
AATACTGAAC TGCGCAAGAG GCTCGGTTTG GACTGA
 
Protein sequence
MVDESNAGPV APAVVADAEV KAPTGKKRSS SRPQKAPPEP AQPKMPAAKR RGYSEQERSE 
KLRLIETKVS EGNILKDAIK SAGISEQTYY HWKGAAKSAA RKDIEGTSPL WAADEFAELV
RLEEENQRLR KQLAEKLRTE NTELRKRLGL D