Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6244 |
Symbol | |
ID | 5320546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1164395 |
End bp | 1164850 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640777844 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001314776 |
Protein GI | 150378181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.286208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGACG AAAGTAATGC AGGGCCAGTT GCTCCGGCTG TAGTGGCGGA TGCAGAAGTG AAAGCACCCA CGGGTAAGAA GCGGAGCTCG TCACGGCCCC AGAAGGCGCC CCCCGAACCA GCTCAACCAA AGATGCCGGC CGCTAAACGC AGGGGATATA GCGAGCAAGA GAGGAGCGAG AAGCTCAGGC TGATTGAGAC AAAAGTCAGC GAAGGCAATA TCCTCAAGGA CGCTATCAAG AGCGCCGGTA TATCAGAGCA AACCTACTAT CATTGGAAAG GTGCTGCTAA GTCAGCCGCG CGAAAGGACA TTGAGGGAAC TAGCCCCTTA TGGGCTGCCG ATGAGTTTGC AGAGCTTGTC CGGCTTGAAG AGGAAAATCA GAGGCTCCGC AAGCAACTGG CGGAGAAGCT GCGAACGGAA AATACTGAAC TGCGCAAGAG GCTCGGTTTG GACTGA
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Protein sequence | MVDESNAGPV APAVVADAEV KAPTGKKRSS SRPQKAPPEP AQPKMPAAKR RGYSEQERSE KLRLIETKVS EGNILKDAIK SAGISEQTYY HWKGAAKSAA RKDIEGTSPL WAADEFAELV RLEEENQRLR KQLAEKLRTE NTELRKRLGL D
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