11 homologs were found in PanDaTox collection
for query gene Patl_1300 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_1300  hypothetical protein  100 
 
 
213 aa  432  1e-120  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.230835  n/a   
 
 
-
 
NC_011312  VSAL_I2345  hypothetical protein  36.43 
 
 
211 aa  83.6  0.000000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004180  hypothetical protein  34.11 
 
 
212 aa  81.6  0.000000000000008  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01190  hypothetical protein  35.25 
 
 
246 aa  81.6  0.000000000000009  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01277  hypothetical protein  34.11 
 
 
212 aa  79.7  0.00000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_1308  hypothetical protein  27.07 
 
 
258 aa  79  0.00000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1799  putative lipoprotein  34.09 
 
 
222 aa  77.8  0.0000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1469  putative lipoprotein  33.93 
 
 
214 aa  74.7  0.0000000000009  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01189  lipoprotein, putative  27.46 
 
 
254 aa  69.3  0.00000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.44908  n/a   
 
 
-
 
NC_011126  HY04AAS1_1022  hypothetical protein  28.45 
 
 
260 aa  52.4  0.000005  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000840658  n/a   
 
 
-
 
NC_007963  Csal_2511  hypothetical protein  32.06 
 
 
188 aa  50.4  0.00002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
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