Gene VIBHAR_01277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01277 
Symbol 
ID5553068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1288111 
End bp1288749 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID640906769 
Producthypothetical protein 
Protein accessionYP_001444481 
Protein GI156973574 
COG category[S] Function unknown 
COG ID[COG5616] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT GGCTTGTTGC CGCATCGATG ATGACGCTTT TAACATCGTG CGCCTACTCA 
CCAATTTACA ATGGTAAAGA ACCGTATTCA GGCAGCCAAT TCATGCTTAT GGACAGCCCT 
CGTCATACGA TGGACTATTT CATTGAGAGT ATGACGGAAG AGTTGATGGT TTCGAACGTT 
GCAGTATCGT CGCGTACACC GATTGCGATT ACTTCTTTTG TCGATCTGCA AAACATGGAT 
GCAACCAACT GGCTTGGTAA CTCGGTATCG GAAGGGTTTA TTCACCAATT CCAACGCCGT 
GGCTTTAAAG TCGTGGATTT CAAAACCACA GGTTCAATCC AAGTGACTCA GCAAGGCGAT 
TTCGCACTGA GCCGTGATTG GCAAGATCTG GCACAAGAGC AAGAGATCCA GTACGTGCTG 
ACAGGCACTA TGCTTCGCCA AGAGGGGGGG GTGTTAGTGA ATGCACGCGT AGTCGGTATG 
CAAAGCCGCA TCGTTGTTGC AACGGCACAA GGCTTCTTAC CTGCGGACCG CATTGGTCGT 
GATTTGGATA CGCTAAACAG TATCCGTACC CAGGATGGCG TGCTTATTCG TTCTGACCCT 
ACTATTCGTC AGCCTTACAC TGTGATTCTC CGCCCGTAG
 
Protein sequence
MKRWLVAASM MTLLTSCAYS PIYNGKEPYS GSQFMLMDSP RHTMDYFIES MTEELMVSNV 
AVSSRTPIAI TSFVDLQNMD ATNWLGNSVS EGFIHQFQRR GFKVVDFKTT GSIQVTQQGD 
FALSRDWQDL AQEQEIQYVL TGTMLRQEGG VLVNARVVGM QSRIVVATAQ GFLPADRIGR 
DLDTLNSIRT QDGVLIRSDP TIRQPYTVIL RP