Gene CPS_1469 details

Gene Information

• Locus tag: CPS_1469
• ID: 3518972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1511891
• End bp: 1512535
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283932
• Product: putative lipoprotein
• Protein accession: YP_268211
• Protein GI: 71278404
• COG category: [S] Function unknown
• COG ID: [COG5616] Predicted integral membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT GGCTTATACC ATTGATTCTG CCAGCTTTAC TCTCGTGTGA GACCACACCT 
GATGAGGGGT TTTATCAAAC TACTCATATT GAAAAAGGTG AAATTGATAG TTACCAATTA 
CCACGACATG CCATCAACGA TGTAGTAAAG GGCCTAGCTT ATCAAATGCT GACGAGCAGT 
AGCTTTGTTA ATGCAAAAAC CCCGGTAGCG GTAGCTTCTT TTGTTGATCT TAAAGATCTT 
GAAACGACTA ACTGGCTTGG TAATCAGCTT GCAGAAAGCT TTGTGCATGA GCTACAGCGA 
CATGGTTTGG TCGTTATAGA CTTTAAAACT ACAGGGCATA TTCGTGTAAC CAAAAAAGGT 
GATTATGTCT TTAGTAGAGA CTGGCAGGAA TTACCTGAAC GTCAGATAAT TGACTACGTA 
GTCTCTGGCA CTATGGTTGA GCAGGAAGAT GGCGTTTTAG TCAATGCCCG TATGATAGGT 
ATTCAATCAA AGGTTGTAGT TGCTACCGCT CAGTCATTTA TCCCTGCTTG GGTTTTGGGT 
GATGAAATGA ATCATAGTGA AAAAGTGAAA ATGAAAGACG GTATGATTAT ACGCGATAAT 
ACTATGTTGC ATAACGATGA ACGTGCTGTG ATTATACAAA ATTAG 

 

Protein sequence

MKKWLIPLIL PALLSCETTP DEGFYQTTHI EKGEIDSYQL PRHAINDVVK GLAYQMLTSS 
SFVNAKTPVA VASFVDLKDL ETTNWLGNQL AESFVHELQR HGLVVIDFKT TGHIRVTKKG 
DYVFSRDWQE LPERQIIDYV VSGTMVEQED GVLVNARMIG IQSKVVVATA QSFIPAWVLG 
DEMNHSEKVK MKDGMIIRDN TMLHNDERAV IIQN