9 homologs were found in PanDaTox collection
for query gene Patl_0323 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0323  hypothetical protein  100 
 
 
503 aa  1014    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1753  FG-GAP repeat-containing protein  33.33 
 
 
768 aa  76.3  0.000000000001  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000543044  n/a   
 
 
-
 
NC_007514  Cag_0738  VCBS  29.3 
 
 
8871 aa  70.5  0.00000000007  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1941  hypothetical protein  29.57 
 
 
758 aa  69.7  0.0000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2783  cell surface protein  31.25 
 
 
2000 aa  66.2  0.000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.992151  normal  0.0101574 
 
 
-
 
NC_009943  Dole_1754  FG-GAP repeat-containing protein  27.78 
 
 
776 aa  63.2  0.00000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000113998  n/a   
 
 
-
 
NC_009943  Dole_1756  FG-GAP repeat-containing protein  31.96 
 
 
708 aa  63.2  0.00000001  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000241186  n/a   
 
 
-
 
NC_009943  Dole_1757  FG-GAP repeat-containing protein  27.5 
 
 
730 aa  53.1  0.00001  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000292234  n/a   
 
 
-
 
NC_009943  Dole_1221  FG-GAP repeat-containing protein  28.67 
 
 
779 aa  44.3  0.005  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000316782  n/a   
 
 
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