| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2783 |
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| Symbol | |
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| ID | 3625111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3545597 |
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| End bp | 3551599 |
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| Gene Length | 6003 bp |
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| Protein Length | 2000 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637701634 |
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| Product | cell surface protein |
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| Protein accession | YP_306264 |
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| Protein GI | 73670249 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1572] Uncharacterized conserved protein
[COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.992151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0101574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAAATA TAACCCCCAA ATACGCAAAA TATATACTTC CAATACTATT AATACTGCTT
TTTGCCGGTA CTGCTTCGGC TTTAAACACA ACAGCACACG ACACGGTTCG AGGTGAGATG
TATGTCTCAT CTATAGCAAA CTGGGATTCT AAACTCTCTA CAAACAATTT TAACGTACCA
AACGGTACCG TTGCTTTTGC ACGATACTAT GTAGGGATCT GGGGTTCCTC TTATCTCGAA
GATGCAACAA TATCCACCAC ATTCAACGGT CATGAATTCG AGACTAACCC GTCTTGTTAT
ATCTCCGGTA TGGGTGTAAC ATGGATACCC TACAATGTCA CAGACTATGT GCAGCCAGGA
GAAAAAAATA CCGCAACTAT CAACTCTAAA TCATGGGGAG ACGGCAGACA GTATGGCACT
ACTCTTGTAG TCGTGCTGAA AAAAGAAAGT AAGCCGCAGA TGGAATACTG GATTGCAGAT
GGTCTTGACT GGCTTCATTA TGGCGAGTAC TTAGGATATT CAGTGGACAA TTCTTTCACA
TATTTCAACG GGACCGTGGA CCTTGCTAAT GTGCAGAGTG CAAGTCTCTA TTCAACCCAC
CTAACTGGGT ATAATTATGA GGATTTCAAT GGAAAATCCC TTTCAAATCC TGCCGATTCA
ACAAGTGGTG GCTATTTTGA CTACATAAGA TGGGACAATG TAAAGGACTC CCTTGTTGCC
GAGAACCAGA CTGTAAACGT GGGACGAGGA AGCGATACCT ATTGTTCTCC AGTGTTCCAC
GCTCTTTCAA TAGAATATAA AGCTTCTGAT CTCATACCAG TGAACCTCAC ACCTTCTGTT
GTAATTGCTA ACACTAGCAA CACCATGACT GCCACCATTG AAAACCAGGG AGACAAAGAT
TCTCAGCCCT TTAATGTATC GCTCATGGTA AAAGGTAAGG TTGTTGATAC GCAGTCTGTT
TCCGGATTGA CCGCTGGAGG TAACACAACG GTTGACCTGC ACTGGACACC TGATGGCAGC
GCAGATACTT ACTCACTCAG CGTGGTTGCA GATCCTGAAA ATACAGTAGT TGAGTCAAAT
GAGAATAACA ACATTCTAAC CTCATTGATA GGCGCTAATT CAGCAACTGC ACCCGTAGCT
GAATTCAGTG CAGACAAGAC TTCTGGCGAT GCTCCACTCA CAGTGACCTT CACAGATCAG
TCGACTAAAT CACCAATATC GTGGTCTTGG GACTTCGACA ATGACGGAAC TATTGACAGC
ACAGAGCAGA ATCCTACCTA CATTTACTCA ACTCCCGGTA ACTACACGGT TAATCTCACG
GTTTCAAACG CAGGCGGAAC GAATTCAAGC CTGAAAATGA ATTATATCAC AGTTTCGGCA
ATCACGCCAG TAGCTAATTT TACTGCAAGT CCGCTCACCG GTGGTACTCC TCTCACAGTA
AATTTCTCTG ATCAGTCAAC TAATACACCA ACTTCGTGGT TCTGGGACTT CGGTGATGGC
ACAAATGCAA CCAATCAAAA CCCCTCGCAC ACTTATGCTG CCGCAGGAAA ATACACTATC
AATCTCACGG TTAGCAATGT AGCTGGGAGC GATTCCGAAA TTAAAACGGA TTACATTAGC
GCTTTCATAC CACCTGTAGC CAACTTCACA GCAACGCCAA CTACTGGAAG TGCACCTCTA
TTAGTTACCT TTACTGACCA GTCAACTAAT ACACCAACAT CGTGGCTCTG GGACTTTGGT
GATGGCAGCA ATTCAACCAG TCAAAACCCC ACACATCTAT ACACCGCTAT TGGTACTTAT
ACTGTTAAAC TTACGGCTAC AAATGTTGCC GGAAACAATA CCACCTCAAA AACAGGATAT
ATTACAACTT CAACAACTTC CGGTCCGGTG TGGGCCTCCA AATCAGAATG GAATGCACCT
GATATAAATA CTTATGCAGC TCCATGTTTA GCTGATCTTG ATGACGACGG AGACTATGAC
CTACTGGATG GTGTATATAG CGGTTATGCA TATGGCTATG AGAATACGGG GACTAAGAAT
AGCCCTGTAT GGACATCGAA ATCTGCATGG AATACACCTG ACATAGGATC TTCTGCAGCT
CTATGTTTAG CCGATCTTGA TAACGATGGA GACTACGACC TGCTGATAGG TGATAAAATC
GGTAAGGTAC ATGGCTACGA GAACACGGGG ACTAAAAACA GCCCGGTGTG GACGACGAAC
TCTGCATGGG ATGTACCTGA CATAGGATCT TCTGCAGTTC CATGTTTAGT AGACCTTGAT
AACGATGGAG ACTACGACCT GCTGATAGGT GAGAAATCCG GTAAAGTATA TGGCTACGAG
AACACGGGGA CTAAAAACAG CCCGGTGTGG ACGGCGAACT CTGCATGGGA TGTACCTGAC
ATAGGATCTT ATGCAGCTCC ATGTTCCTCT GATCTTGACG AAGACGGAGA CTACGACCTA
CTTATAGGCA ATACAGATGG TACCTCATAT GCTTATGAGA ACACAGGGAC TAAAAATAGC
CCTGTATGGA CGCAGAAATC TGCATGGAAT GCACCTAATA TCATAGAACC AATAGCTCAT
CCATACTTAG CCGATCTTGA CGGTGACGGG GACTATGACT TACTCGTAGG GGCGTATGGT
GGTAGCATCT ATGGCTACGA AAACACCGCT GTTTCAGCCG TAGCAAAACC AGATATAATT
CCTACTGAAA TTATCCCATC ATCAAGTATT ACCGCGAACA CTCTCTGCAT CATTAGCTCT
ACCATTAATA ACACCGGTAC AGAGAATGTA GATACCTTTA ACGCGACTCT TTCCGTAAAC
GACACGGTGG TAGATACGCA GTCTGTTTCA GGCATTGCAT CAGGCAGCAG CTCTACAGTG
AACTTCTCGT GGACACCGAA ATCAGCGGAT GACTATAACC TCACTGTAAC TGCAGATCCA
GAAAATGAGA TAGATGAATC GGACGAGACG AACAATGCGC TTAAAGTACT TGTCACAGCT
TCTTCGGCAT CGGCAACCCT GGTTGCGAAC TTCTCTGCTG ACGTAACGAA AGGTACGGTT
CCTCTCAGTG TGAATTTCAC TGACCAGTCA ACAGGTTCCC CAACATCCTG GTTCTGGGAC
TTCGGAGACG GTACTAATGC TACCGAGCAG AACCCCGTGC ATATCTACAG TAAAGTCGGA
AACTATACAG TCAACCTTAC GGTTGAAAAT GCAGACGGAA GTAATTCTGA AGTAAAGACT
GAATACATTG TGGTAAGTGA ACCACTGCCT GGAGCACCGG TTGCAAACTT CACAGCCAAT
CGGACCAGTG GAAAGGCTCC GCTTGACGTT CAGTTCACCG ATGTATCAAC TGGAAATATC
TCATCCTATG CATGGGACTT TGATAACGAT GGCAACGTAG ACAGTACTGA GCAGAACCCT
ATTCACACTT ACACCGCAGC TTGGAACTAT ACCGTCAACC TTACGGTCAC AAATGAAGCC
GGAAGCAACA GCACAGTAAA GACGGATTAT ATCACTGTAA GTTCAGCGAA AACTAACGAT
CTCACTATCT CCGGAATCAT AAACACTGTA CCAGGCTCTG CAGTCTTTGC CAAGGAGGCA
AACACTGTAA AGATAACCGA TGTCAAGAAC ACCGGAACTG ACACCCTTAC TAACATTTCG
CTGTCTCTAT ATGCAAGCGA CGTGTCCGAT GGAACAGTTC CGGTAAACAC AACAACAATT
GTTTCCCTTG CAAGTGGAGA GACAGTAACC GTATCCTTAA TTGACCCCAC AATCCGCAGC
CTGGAAGGCG GCACCGTAAC CTACACTGCA GTTGTCGACC CTGACAACCT TATTCCTGAA
AATAACGAGG CAAACAACAA TGCCAGTGTG GATAAGTCTG TCAAATACAA TGGGTATAAA
GGCAAACGCT ACTGGGAAGG TGGAAGTGAT ATCACAACGA AAGAGACCTA TGATCTCCAG
GGTAACCTTC TGTACTCCAC CCAATCTTCT TCTGCTTATA AGGGTGTAAA ATGGGCTAAC
AGGACAGAAA CCTGGACAGC AAGCGACCTT TTGATTCCGA GCGGTTCTAC TGTGGAAAAA
GCCGTGCTCT ATATGTCCTA TAACTGGGAT ACAACTTCTG GAGGAGTGCC AAAATGGACT
GCAACCTTCA ACGGAAACAC GCTTGCAAAC GGTACCCTCT ACACTGACAA GAGTAATTTC
GGTAGTTATG CGAATTATAC ATACGGTCTC TATGTCTTCG ATGTAACAGA TCAGTTCAAT
ACTGCTGGAA ACAACCTTAC CATGACACCT GACTCTGAAA ACAGCAATGC TCTGTACCCC
AGCACTCTGG TAGTGGTCTA CCGCGATTCT AACGAAACCA GGAAACAAAT CTTCATCAAT
GAAGAATGCG ACGAACTAGC TTATTCTCCT ACTAGTTACG GAACTACGCT TGAAGAAGCC
ACTGCCTATG CTCCTTTCAC AGGCATGTCT GTTGACGTGA GTAAGGTAAG GAACGCTACG
CTGTACAGTT TCGCAGGAAG TGCCGGTCCA GATGAAGGGA ATCTGCTCTT CAATGGCAAT
ACCGTTGCAA GCAATGCATG GCAGGGAAAT GCAAGCTCCA GCAATGCACA GGTTTTTGAC
GTGAAAAATT ACATTAACAA AACCGGTAAC GAGGCAGGTA TCCAGGAAAC AATACGCGGA
GGTATGAATG TGCTCCAGCA GATCCTTGTT GTTGAATATC AGGAAGAACA AGAATCTGCA
CCAGTAGCTA ACTTTACTGC AAATGTAACA ACCGGTACAG CACCAATGAC CGTAGAATTC
ACAGATATCT CGACTGGCTC GCCGACGGGC TGGCAGTGGG ATTTCAACGA TGATGGGATA
ATTGACAGTA CTGAGCAGAA CCCTATCTAC ACATATTCAA CAGTAGGTAA CTATACCGTC
AACCTTACTG TTGTCAATGC TGACGGTAAC GATTCTGAAG TAAAGACTGA ATACATTGTG
GTAAGTGAAC CATTGCCTGG AGCTCCGGTT GCAAACTTTA CTGCAACTCC GACGTCTGGT
AATGCTCCTC TCACTGTCAA CTTTACGGAT CAGTCAAATG GCAATATCTC ATCCTATGCA
TGGGACTTTG ATAACGATGG AACAGTTGAC AGCACTGAGC AGAACCCTAT CTACACTTAT
GCTGCAGCCG GTACCTACAC TGTCAACCTT ACGGTTGCAA ATGCTAACGG TAACGATTCT
GAGGTAAAAA CTGAGTATAT TAAGGTCTCC AGTCAATCTT CAGCAAAGCC AGTAGCTGAA
TTTTCTGCGA ATCCAACATC AGGAAAAACA CCATTAAAGG TTAAATTTAC TGACACAAGC
ACTGGTTCTC CAACTTTCTG GTTCTGGAAA TTTGGGGACG GGTCAAAGTC ATTCCACCAG
AACCCTGTTC ACAAGTATTC AAAGGCAGGA ACATATACTG TTAACTTGAC TGTAAAGAAT
GCTAAAGGCA AGAACACGGT AACAAAAACA GAATACATAA AAGTGATAAC AAAACCTGCT
GCAAACTTCA ACAGCAGTGT TACATTAGGA AAAACACCAT TAAAGGTTAA ATTTACTGAC
ACAAGTACAG GAATACCTGC TAAATGGAGA TGGGACTTTG GAGATGGAGC AAAGTCATTC
CTCAAGAATC CGGTTCACAA GTATTCTAAG GCAGGAACAT ATACTGTTAA CTTGACAGTA
AAGAATGCTA AAGGCAAGAA CACGGTAACA AAAACAGAAT ATATAAAAGT GATTACAAAA
CCAGCTGCAA ACTTTTCTGC AACTCCAACC TCAGGAAAAA CGCCATTAAA GGTTAAATTT
ACTGACACAA GTACAGGAAT ACCTGCTAAA TGGAGGTGGG ACTTTGGAGA CGGAGCAAAG
TCATTCCATC AGAATCCTGT TCACAAGTAT TCAAAGGCAG GAACATATAC TGTTAACTTG
ACAGTAAAGA ATGCTAAAGG CAAGAACACG GTAACAAAAA CACAATATAT AAAAGTTGTA
TAA
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| Protein sequence | MINITPKYAK YILPILLILL FAGTASALNT TAHDTVRGEM YVSSIANWDS KLSTNNFNVP
NGTVAFARYY VGIWGSSYLE DATISTTFNG HEFETNPSCY ISGMGVTWIP YNVTDYVQPG
EKNTATINSK SWGDGRQYGT TLVVVLKKES KPQMEYWIAD GLDWLHYGEY LGYSVDNSFT
YFNGTVDLAN VQSASLYSTH LTGYNYEDFN GKSLSNPADS TSGGYFDYIR WDNVKDSLVA
ENQTVNVGRG SDTYCSPVFH ALSIEYKASD LIPVNLTPSV VIANTSNTMT ATIENQGDKD
SQPFNVSLMV KGKVVDTQSV SGLTAGGNTT VDLHWTPDGS ADTYSLSVVA DPENTVVESN
ENNNILTSLI GANSATAPVA EFSADKTSGD APLTVTFTDQ STKSPISWSW DFDNDGTIDS
TEQNPTYIYS TPGNYTVNLT VSNAGGTNSS LKMNYITVSA ITPVANFTAS PLTGGTPLTV
NFSDQSTNTP TSWFWDFGDG TNATNQNPSH TYAAAGKYTI NLTVSNVAGS DSEIKTDYIS
AFIPPVANFT ATPTTGSAPL LVTFTDQSTN TPTSWLWDFG DGSNSTSQNP THLYTAIGTY
TVKLTATNVA GNNTTSKTGY ITTSTTSGPV WASKSEWNAP DINTYAAPCL ADLDDDGDYD
LLDGVYSGYA YGYENTGTKN SPVWTSKSAW NTPDIGSSAA LCLADLDNDG DYDLLIGDKI
GKVHGYENTG TKNSPVWTTN SAWDVPDIGS SAVPCLVDLD NDGDYDLLIG EKSGKVYGYE
NTGTKNSPVW TANSAWDVPD IGSYAAPCSS DLDEDGDYDL LIGNTDGTSY AYENTGTKNS
PVWTQKSAWN APNIIEPIAH PYLADLDGDG DYDLLVGAYG GSIYGYENTA VSAVAKPDII
PTEIIPSSSI TANTLCIISS TINNTGTENV DTFNATLSVN DTVVDTQSVS GIASGSSSTV
NFSWTPKSAD DYNLTVTADP ENEIDESDET NNALKVLVTA SSASATLVAN FSADVTKGTV
PLSVNFTDQS TGSPTSWFWD FGDGTNATEQ NPVHIYSKVG NYTVNLTVEN ADGSNSEVKT
EYIVVSEPLP GAPVANFTAN RTSGKAPLDV QFTDVSTGNI SSYAWDFDND GNVDSTEQNP
IHTYTAAWNY TVNLTVTNEA GSNSTVKTDY ITVSSAKTND LTISGIINTV PGSAVFAKEA
NTVKITDVKN TGTDTLTNIS LSLYASDVSD GTVPVNTTTI VSLASGETVT VSLIDPTIRS
LEGGTVTYTA VVDPDNLIPE NNEANNNASV DKSVKYNGYK GKRYWEGGSD ITTKETYDLQ
GNLLYSTQSS SAYKGVKWAN RTETWTASDL LIPSGSTVEK AVLYMSYNWD TTSGGVPKWT
ATFNGNTLAN GTLYTDKSNF GSYANYTYGL YVFDVTDQFN TAGNNLTMTP DSENSNALYP
STLVVVYRDS NETRKQIFIN EECDELAYSP TSYGTTLEEA TAYAPFTGMS VDVSKVRNAT
LYSFAGSAGP DEGNLLFNGN TVASNAWQGN ASSSNAQVFD VKNYINKTGN EAGIQETIRG
GMNVLQQILV VEYQEEQESA PVANFTANVT TGTAPMTVEF TDISTGSPTG WQWDFNDDGI
IDSTEQNPIY TYSTVGNYTV NLTVVNADGN DSEVKTEYIV VSEPLPGAPV ANFTATPTSG
NAPLTVNFTD QSNGNISSYA WDFDNDGTVD STEQNPIYTY AAAGTYTVNL TVANANGNDS
EVKTEYIKVS SQSSAKPVAE FSANPTSGKT PLKVKFTDTS TGSPTFWFWK FGDGSKSFHQ
NPVHKYSKAG TYTVNLTVKN AKGKNTVTKT EYIKVITKPA ANFNSSVTLG KTPLKVKFTD
TSTGIPAKWR WDFGDGAKSF LKNPVHKYSK AGTYTVNLTV KNAKGKNTVT KTEYIKVITK
PAANFSATPT SGKTPLKVKF TDTSTGIPAK WRWDFGDGAK SFHQNPVHKY SKAGTYTVNL
TVKNAKGKNT VTKTQYIKVV
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