6 homologs were found in PanDaTox collection
for query gene PSPTO_5209 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_5209  hypothetical protein  100 
 
 
392 aa  818    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5413  EF hand domain protein  97.79 
 
 
792 aa  743    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5204  EF hand domain protein  70.42 
 
 
674 aa  117  3e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5210  EF hand domain protein  61.25 
 
 
310 aa  112  1.0000000000000001e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.421442  n/a   
 
 
-
 
NC_004578  PSPTO_5206  EF hand domain protein  60 
 
 
310 aa  108  2e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0108  glycoside hydrolase family protein  33.75 
 
 
1054 aa  53.5  0.000007  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
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