16 homologs were found in PanDaTox collection
for query gene Oter_0962 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010571  Oter_0962  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  100 
 
 		 285 aa  577  1e-164  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.56065 
 
 
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NC_013440  Hoch_3381  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  33.7 
 
 		 655 aa  122  9.999999999999999e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.26749  normal  0.167867 
 
 
-
 
NC_013440  Hoch_1554  hypothetical protein  32.38 
 
 		 279 aa  108  8.000000000000001e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
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NC_009428  Rsph17025_1291  N-acetylmuramoyl-L-alanine amidase  35.42 
 
 		 290 aa  53.1  0.000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2109  N-acetylmuramoyl-L-alanine amidase  35.42 
 
 		 290 aa  53.1  0.000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.395823  normal  1 
 
 
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NC_007643  Rru_A0960  AmpD (negative regulator of AmpC)  38.82 
 
 		 241 aa  52  0.00001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0865958  n/a   
 
 
-
 
NC_002978  WD1073  N-acetylmuramoyl-L-alanine amidase  32.22 
 
 		 497 aa  47.8  0.0002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  unclonable  0.00874601  n/a   
 
 
-
 
NC_007794  Saro_3051  negative regulator of AmpC, AmpD  33.68 
 
 		 234 aa  47.4  0.0003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.8874  n/a   
 
 
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NC_011138  MADE_01632  N-acetylmuramoyl-L-alanine amidase, putative  25.12 
 
 		 315 aa  45.8  0.0007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_006369  lpl0316  hypothetical protein  28.44 
 
 		 218 aa  44.3  0.002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_5368  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  36.71 
 
 		 589 aa  44.3  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.621632  normal  0.350782 
 
 
-
 
NC_006368  lpp0335  hypothetical protein  24.14 
 
 		 218 aa  43.9  0.003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_2885  N-acetylmuramoyl-L-alanine amidase  29.13 
 
 		 220 aa  43.5  0.003  Acidiphilium cryptum JF-5  Bacteria  normal  0.523891  n/a   
 
 
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NC_013132  Cpin_2795  peptidase C14 caspase catalytic subunit p20  26.2 
 
 		 1316 aa  44.3  0.003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.45059  normal  0.111858 
 
 
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NC_013440  Hoch_2813  hypothetical protein  32.94 
 
 		 378 aa  43.9  0.003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.528989  normal  1 
 
 
-
 
NC_013440  Hoch_2886  hypothetical protein  33.33 
 
 		 246 aa  42.7  0.007  Haliangium ochraceum DSM 14365  Bacteria  normal  0.492471  normal  1 
 
 
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