Gene Rsph17025_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1291 
Symbol 
ID5084804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1325607 
End bp1326479 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID640482850 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001167497 
Protein GI146277338 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG AGAACCACCG TCTTTCCGGC GTCGCCTTCC AGCAGGCGAA GAACATTGGC 
CGCGAGATCG TTCCGGAGAT CGTGATCCTC CACGACACCG CGAGCCGGAT CACCAAGGGC
TCGGCCGCGA CCTACCTTGC CAGCGCGCCG AACGGTGTCT CGGTCCACTT CGTCGTCGAG
ATCGACGGCA CGGTCGTCCA GCAGGTCCCC ACCAACCGCC GCGCGGGGCA CGCCGGCAAG
TCGAGCTTCC ACGGGCGAAC CGGCTGCAAC GACTTCTCGA TCGGCATCGA GATCGTGAAC
CCCGGCCGCA TGACGCGCCT CTCGGATGCC CAGTGCGCTG CCTGGTACGG CGAAACCTTC
GCCACCAACC TGTTCGGCAT CCGGGAGGTC GAGACGCCCC AGCATGGCCG CGGCCTCTGG
ATGCCCTATC CCGAGGCGCA GATGACGGCG GTTCTGGATC TGCTGCGGTC GCTGTTCGAC
GGCATCCCGA CACTGCGCGA CATCACCACC CACTGGTATG TCTCCCCGGG GCGGAAGGTC
GACACGAACC CGCTGTTCCC GCTCGAGCAC GTCCGCGCCC GCATCCTCGG CCGCGACGAT
CCTGCTGACG CCGAGGCCGA GGCCTTCTCG GAAGCCGTGA AGCCGACCGC CCGCGATCCC
AGGATGGTGG TCGTGGATAC CAGTGGCGAC AGCCTGAACC TGCGCCGCTG GCCCTCCTTC
AACCCGAACG TCCTGGCCCG CATCCCCGAC GGCACGCCGG TGCCGGTGCT GCGCCGCGGG
ACCTTCGACG GCCGCGAATG GCTGCAGGTG GCCTACGGCG GCCACGAGGG CTGGATCGTC
GCCGCCTACA CCGCCCATTT CCTGCCCGCC TGA
 
Protein sequence
MRIENHRLSG VAFQQAKNIG REIVPEIVIL HDTASRITKG SAATYLASAP NGVSVHFVVE 
IDGTVVQQVP TNRRAGHAGK SSFHGRTGCN DFSIGIEIVN PGRMTRLSDA QCAAWYGETF
ATNLFGIREV ETPQHGRGLW MPYPEAQMTA VLDLLRSLFD GIPTLRDITT HWYVSPGRKV
DTNPLFPLEH VRARILGRDD PADAEAEAFS EAVKPTARDP RMVVVDTSGD SLNLRRWPSF
NPNVLARIPD GTPVPVLRRG TFDGREWLQV AYGGHEGWIV AAYTAHFLPA