| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0960 |
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| Symbol | |
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| ID | 3833634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1145882 |
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| End bp | 1146607 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637825048 |
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| Product | AmpD (negative regulator of AmpC) |
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| Protein accession | YP_426048 |
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| Protein GI | 83592296 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0865958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCCAGCC GTCCCGCCCC CCCGGATTTC CCGGTTATCG AGGCCCTCTC GCCCAATGCC
GATGACCGCC CGCCCGGGCA GATCATCGAC ATGCTGGTGA TCCATTACAC CGGCATGCCC
AGCGCGCAGG CGGCCCTGGC GCGCCTCCTC GATCCCCAGG CCCAGGTCAG CGCCCACTGG
CTGATCGACG AGGATGGAAC GGCCTATAAG CTGGTCGAGG AACGCCGCCG GGCCTGGCAC
GCCGGCGTCT CGGCCTGGGG CGGCCGCCCA GGGGTCAATG CCCGCTCGAT CGGCATCGAA
TTGGTCAATC CCGGCCACGA ATTCGGCTAC CGCCCCTTCC CCGAGGCCCA GATGACCACC
CTGATCGCCC TTGGCCGGGG TATTCTGGAG CGCCATCCCA TCCCCGCGGC CCATGTCGTC
GGCCATGCCG ATGTCGCCCC GACCCGCAAG GAGGACCCGG GAGAACTGTT CGACTGGCAG
AGACTCGCCT CAAACGGCAT CGGCCGCTGG CCGCCCCCAC CCTTGGGCGT CCGCCCGGAG
ACGGTTGACG CGACCGAGGG CGAAGCGGCC TGCCTTCTTG AACAAATAGG CTATGATATC
AGTTCCTTAC AAGCCACTGT TCTCGCCTTT CAGCGTCACT TCCGCCCAAA GCGCCTCGAT
GGTCGTATCG ACTCGGAAAC GCTTTGGCTA ATCAAGGCTC TTGCCCGTGA CGTTCAAGCC
CATTAA
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| Protein sequence | MASRPAPPDF PVIEALSPNA DDRPPGQIID MLVIHYTGMP SAQAALARLL DPQAQVSAHW
LIDEDGTAYK LVEERRRAWH AGVSAWGGRP GVNARSIGIE LVNPGHEFGY RPFPEAQMTT
LIALGRGILE RHPIPAAHVV GHADVAPTRK EDPGELFDWQ RLASNGIGRW PPPPLGVRPE
TVDATEGEAA CLLEQIGYDI SSLQATVLAF QRHFRPKRLD GRIDSETLWL IKALARDVQA
H
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