10 homologs were found in PanDaTox collection
for query gene Nham_4447 on replicon NC_007960
Organism: Nitrobacter hamburgensis X14



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007960  Nham_4447  conjugal transfer protein, trbC  100 
 
 		 101 aa  189  8e-48  Nitrobacter hamburgensis X14  Bacteria  normal  0.633969  n/a   
 
 
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NC_009622  Smed_6407  VIRB2 type IV secretion fmaily protein  50 
 
 		 112 aa  72.4  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
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NC_009669  Oant_4564  VIRB2 type IV secretion fmaily protein  47.56 
 
 		 115 aa  66.2  0.0000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.123188  n/a   
 
 
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NC_008242  Meso_4179  VIRB2 type IV secretion  46.99 
 
 		 111 aa  65.9  0.0000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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NC_011986  Avi_9822  type IV secrection system pilin protein  48.53 
 
 		 116 aa  62.4  0.000000002  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_009717  Xaut_5088  VIRB2 type IV secretion fmaily protein  42.86 
 
 		 100 aa  45.8  0.0002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
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NC_007798  NSE_0770  type IV secretion system protein VirB2  35.9 
 
 		 115 aa  45.1  0.0004  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  1  n/a   
 
 
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NC_012792  Vapar_5814  Conjugal transfer protein TrbC  42.42 
 
 		 110 aa  42.4  0.002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_007798  NSE_0768  putative type IV secretion system protein VirB2  31.87 
 
 		 121 aa  40.8  0.006  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  1  n/a   
 
 
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NC_009475  BBta_p0257  Type IV secretory pathway AvhB2 protein  37.35 
 
 		 98 aa  40.4  0.008  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
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