12 homologs were found in PanDaTox collection
for query gene Nham_3304 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_3304  hypothetical protein  100 
 
 
246 aa  513  1e-144  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1943  hypothetical protein  31.34 
 
 
285 aa  54.7  0.000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.0650141  decreased coverage  0.00812028 
 
 
-
 
NC_011060  Ppha_2494  hypothetical protein  29.1 
 
 
221 aa  53.1  0.000004  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0363  hypothetical protein  29.55 
 
 
274 aa  52.4  0.000008  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0331  hypothetical protein  31.67 
 
 
274 aa  49.3  0.00005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.18977 
 
 
-
 
NC_010172  Mext_0287  hypothetical protein  30 
 
 
274 aa  47  0.0003  Methylobacterium extorquens PA1  Bacteria  normal  0.900559  normal 
 
 
-
 
NC_011369  Rleg2_4212  Cephalosporin hydroxylase  35.04 
 
 
252 aa  46.2  0.0004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4503  Cephalosporin hydroxylase  34.78 
 
 
252 aa  46.2  0.0005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0207174  normal 
 
 
-
 
NC_011894  Mnod_7243  hypothetical protein  28.79 
 
 
270 aa  45.4  0.0008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.36563  n/a   
 
 
-
 
NC_007964  Nham_2762  hypothetical protein  27.06 
 
 
369 aa  45.1  0.001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0927  hypothetical protein  29.93 
 
 
297 aa  43.1  0.005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.572392 
 
 
-
 
NC_012850  Rleg_0452  O-methyltransferase family 3  25.4 
 
 
346 aa  42  0.009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
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