Gene Nham_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2762 
Symbol 
ID4031193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3044401 
End bp3045510 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content53% 
IMG OID637971214 
Producthypothetical protein 
Protein accessionYP_578000 
Protein GI92118271 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAA CGTCGCTGCG CGAACTTTTC TCCAACATCC GAAAATCCTC CGACAAATGG 
GAGCTCTATC TTGACGTCTA TGAGGGCCTA TTCGCTCCTT TCCGCGGACG GCCCATTTCA
ATTCTCGAGA TCGGAATCCA GAATGGCGGG TTCACTGAGG TGCTTGCCGC TTATTTCCCG
AATGCGGTGA AGATCGTTGG ATGCGACATC GACGAGAAAT GCGGTTCTCT GGTGGCCTCG
GATCCGCGCA TTTCGGTGGT GATCGGCGAT GCGATTGACG CTGGCACGGC TGGCCGCATC
AAGGAAATAT CTGACAGCTT CGATATCGTG ATCGATGATG GCTCACATAG ATCGAAAGAT
ATCATTGCTG CGTTCTGTCG CTATTTTCCG CTCCTGCGGG AGGACGGCGT CTTCATCGCC
GAGGACCTGC ACTGCAGCTA CTGGCACGAA TACGAGGGAG GGCTCGCGCA TCAGTTTTCG
TCCATAAGCT TCTTCAAGCT CCTCAGCGAC GTCGTCAACT ACGAACATTG GGGCCTCTCT
TACCCTCGGA CGCGCCTACT GTCGGATATG TTTCAGCATC ATAGCTGCGA GATCAGTGAT
GACGTACTCG AGACGATCTT TTCCGTGACG TTCTGCAATT CGATGAGCAT AGTACGGAAG
AAGGCCGCAT CTGCTGTCCT CCTTGGAGAG CGTGTCATAG GCGGAACCGA GTTCGCTGTG
GCGGACAATG CGCCCCACAA TCATAGCCAT GCGGCGCGCA ACGACCAGCG GGGCAATCCG
TTCTCCGATC TCGATCTTAT TACTAACAAG CATGTCTTTG GCCTTTTTGT CGCTCTCTTG
AACGCAAACT CCAAACTTTC CGTCGATCAC GCGAGACTGG CCGAGCAATT GCAGGCCGTG
AGTTTCGGTA TCGCAGAATC GCAACAGAAT CAGCAGAGCT GGATTGTCGA GCCTCTCGCA
AGCTTGAGCT CCAATCTTGA AACCGCACAG GGGAACAATC ACAAGGAGAT AGTTGAAAGG
CTCGCGCTCC TAACTTCAGA CGTGGAAACA ATAAAGCAGA AGAATACCTT CTTTGATTGG
CTTCGAGTTA AGATCGGCAG CGGTAGCTGA
 
Protein sequence
MIQTSLRELF SNIRKSSDKW ELYLDVYEGL FAPFRGRPIS ILEIGIQNGG FTEVLAAYFP 
NAVKIVGCDI DEKCGSLVAS DPRISVVIGD AIDAGTAGRI KEISDSFDIV IDDGSHRSKD
IIAAFCRYFP LLREDGVFIA EDLHCSYWHE YEGGLAHQFS SISFFKLLSD VVNYEHWGLS
YPRTRLLSDM FQHHSCEISD DVLETIFSVT FCNSMSIVRK KAASAVLLGE RVIGGTEFAV
ADNAPHNHSH AARNDQRGNP FSDLDLITNK HVFGLFVALL NANSKLSVDH ARLAEQLQAV
SFGIAESQQN QQSWIVEPLA SLSSNLETAQ GNNHKEIVER LALLTSDVET IKQKNTFFDW
LRVKIGSGS