17 homologs were found in PanDaTox collection
for query gene Nham_3122 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_3122  molybdopterin-guanine dinucleotide biosynthesis protein A  100 
 
 
172 aa  338  2.9999999999999998e-92  Nitrobacter hamburgensis X14  Bacteria  normal  0.0516207  n/a   
 
 
-
 
NC_010725  Mpop_0453  molybdopterin-guanine dinucleotide biosynthesis protein A  41.57 
 
 
180 aa  128  4.0000000000000003e-29  Methylobacterium populi BJ001  Bacteria  normal  0.469559  normal 
 
 
-
 
NC_011894  Mnod_5274  molybdopterin-guanine dinucleotide biosynthesis protein A  44.23 
 
 
178 aa  126  1.0000000000000001e-28  Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.00877688  n/a   
 
 
-
 
NC_010172  Mext_0385  molybdopterin-guanine dinucleotide biosynthesis protein A  39.41 
 
 
172 aa  125  4.0000000000000003e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.0193499  normal 
 
 
-
 
NC_011757  Mchl_0417  molybdopterin-guanine dinucleotide biosynthesis protein A  39.41 
 
 
172 aa  124  5e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.657903 
 
 
-
 
NC_010511  M446_3083  molybdopterin-guanine dinucleotide biosynthesis protein A  42.94 
 
 
175 aa  124  7e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0134346 
 
 
-
 
NC_010505  Mrad2831_3199  molybdopterin-guanine dinucleotide biosynthesis protein A  41.07 
 
 
170 aa  123  1e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.172703  normal 
 
 
-
 
NC_009621  Smed_5495  molybdopterin-guanine dinucleotide biosynthesis protein A  41.4 
 
 
172 aa  121  4e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.131471  normal 
 
 
-
 
NC_008254  Meso_2445  molybdopterin-guanine dinucleotide biosynthesis protein A  44.44 
 
 
170 aa  110  1.0000000000000001e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0397  hypothetical protein  33.94 
 
 
214 aa  87  1e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0500  hypothetical protein  33.33 
 
 
178 aa  67.8  0.00000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3714  hypothetical protein  28.3 
 
 
155 aa  50.1  0.00002  Thauera sp. MZ1T  Bacteria  normal  0.461973  n/a   
 
 
-
 
NC_010524  Lcho_3730  hypothetical protein  32.89 
 
 
159 aa  48.1  0.00006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.485732 
 
 
-
 
NC_007973  Rmet_2766  hypothetical protein  31.43 
 
 
178 aa  45.1  0.0004  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1164  hypothetical protein  31.87 
 
 
166 aa  43.9  0.001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0143134  normal  0.521889 
 
 
-
 
NC_013456  VEA_003499  hypothetical protein  26.49 
 
 
154 aa  43.1  0.002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0830  hypothetical protein  28.06 
 
 
176 aa  42.4  0.004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal 
 
 
-
 
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