Gene Dshi_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0500 
Symbol 
ID5711416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp485120 
End bp485656 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID641266404 
Producthypothetical protein 
Protein accessionYP_001531849 
Protein GI159043055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTG AAGTGATCCG TGTCGCCGTG GTGGGCGTGT CGCATCCGCC GGCCAACAAA 
TGGGCCAAGC GCGTGGTGCG GCCTTCGGCG CTCATGGCCG AGCTGCCCGC CCTCGACATG
GGGGCGCTGA TGTCGGAGCA GGGGGATGTG CGCGCCTATT ACATGGGCGA TCATGCGGTC
GTTCTCCACT CGGGCGAGAC AAGGCATTAC ATCGACAACC TGCGCGCCAT GCGGCCGTCG
CTCTGGGTGT CGTGTGATGG CGATGAGGTG CGGTTGGTCA CCGCGGATCC CTATGAGGGC
GAGGCGATGG CCAGCGATCC CGAGCGGGTC GTCGAAGCGC TTGCCATGCC GCGTGCGGTG
GTAGCCAGGA TCGAGGCCTT TATCGAGGCC CATCATGTCC ACGAGGAGTT CCACAAGCGC
AAGCGCGTGC CCGCCACGTC CCAGCATGAC CCGCGCGCGC CACGGGTGTT GTCGGACAAT
GAAAAATGGG TGCAGACACG GGGCAAGGCG GGTTTGCCGC CGAAGGGGGC TGGATGA
 
Protein sequence
MPREVIRVAV VGVSHPPANK WAKRVVRPSA LMAELPALDM GALMSEQGDV RAYYMGDHAV 
VLHSGETRHY IDNLRAMRPS LWVSCDGDEV RLVTADPYEG EAMASDPERV VEALAMPRAV
VARIEAFIEA HHVHEEFHKR KRVPATSQHD PRAPRVLSDN EKWVQTRGKA GLPPKGAG