17 homologs were found in PanDaTox collection
for query gene LEUM_1995 on replicon NC_008531
Organism: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008531  LEUM_1995  phosphotransferase system, galactitol-specific IIB component  100 
 
 
101 aa  204  2e-52  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0327  phosphotransferase system lactose/cellobiose- specific IIB subunit  51.55 
 
 
102 aa  112  1.0000000000000001e-24  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_2751  phosphotransferase system lactose/cellobiose- specific IIB subunit  37.62 
 
 
100 aa  76.6  0.0000000000001  Brachyspira murdochii DSM 12563  Bacteria  normal  0.0267952  n/a   
 
 
-
 
NC_008261  CPF_0646  putative PTS system, ascorbate-specific IIB component SgaB  40.74 
 
 
96 aa  65.1  0.0000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1814  PTS system, IIB component  31.03 
 
 
92 aa  51.2  0.000005  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0123  phosphotransferase system lactose/cellobiose- specific IIB subunit  29.21 
 
 
94 aa  49.7  0.00001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2251  phosphotransferase system lactose/cellobiose-specific IIB subunit  34.78 
 
 
97 aa  46.2  0.0001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.470891  n/a   
 
 
-
 
NC_009674  Bcer98_2010  phosphotransferase system lactose/cellobiose-specific IIB subunit  31.03 
 
 
89 aa  45.4  0.0003  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000312148  n/a   
 
 
-
 
NC_012917  PC1_1955  phosphotransferase system lactose/cellobiose-specific IIB subunit  32.61 
 
 
97 aa  45.4  0.0003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.876388  n/a   
 
 
-
 
NC_011313  VSAL_II0823  PTS system, lactose/cellobiose specific IIB subunit  32.18 
 
 
89 aa  44.7  0.0004  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.479852  n/a   
 
 
-
 
NC_013517  Sterm_0143  phosphotransferase system lactose/cellobiose- specific IIB subunit  31.88 
 
 
92 aa  44.7  0.0004  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.152358  n/a   
 
 
-
 
NC_003909  BCE_2982  PTS system, lactose/cellobiose specific IIB subunit  29.89 
 
 
89 aa  44.7  0.0004  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000466045  n/a   
 
 
-
 
NC_006274  BCZK2663  sugar phosphotransferase component II B  28.74 
 
 
89 aa  42.4  0.002  Bacillus cereus E33L  Bacteria  normal  0.168546  n/a   
 
 
-
 
NC_009456  VC0395_0983  PTS system ascorbate-specific transporter subunits IICB  25.27 
 
 
586 aa  41.6  0.004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1322  phosphotransferase system lactose/cellobiose- specific IIB subunit  31.46 
 
 
93 aa  41.2  0.005  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_2257  phosphotransferase system lactose/cellobiose-specific IIB subunit  31.73 
 
 
104 aa  40.4  0.007  Serratia proteamaculans 568  Bacteria  normal  0.74172  hitchhiker  0.0000885847 
 
 
-
 
NC_012917  PC1_3549  phosphotransferase system lactose/cellobiose-specific IIB subunit  41.67 
 
 
95 aa  40  0.01  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>