| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0983 |
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| Symbol | sgaT |
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| ID | 5134872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 959025 |
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| End bp | 960785 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531305 |
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| Product | PTS system ascorbate-specific transporter subunits IICB |
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| Protein accession | YP_001215819 |
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| Protein GI | 147672271 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG3037] Uncharacterized protein conserved in bacteria
[COG3414] Phosphotransferase system, galactitol-specific IIB component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCT TGTACGACGT TTTCTATATT TTTTACAGCC AAGTAATGAC CAAAGCCCCT
TTGCTGCTAG GGCTAGTCAC CTTAATCGGC TATTGGCTGC TAAGACGCGA TGCGACAACC
ATCATTAAAG GTTCAATCAA AACCATTGTC GGTTTTATGC TGGTACAAGT GGGCGCAGGC
ACACTGGTCG CTGGCTTTAA ACCTGTGATT GAAAAGCTGT CGCAATACCA CGGTTTAACC
GGATCAGTGA TTGACCCCTA CACCTCGATG ATGGCCACCA TGGAAACCAT GGGCGACAAC
TATTCATGGG TCGGGTACGC CGTGCTGCTA GCACTGGCGA TCAACATTCT GTTGGTGCTG
TTTCGCCGCT ACACCGGCAT TCGTACCATC ATGCTGACTG GACACATCAT GTTCCAGCAA
GCGGGTTTGA TTGCGGTGTT CTACTTTGTG CTCGGCGCTG GCATGTGGGA AACCATCATT
TATTCGGCGG TATTGATGGC GCTCTACTGG GGCATCTCTT CTAACATCAT GTTCAAACCG
ACCGAAGAAG TCACTGGCGG CGCGGGTTTC TCCATCGGCC ACCAACAGCA AGTCGCTTCA
TGGATCGCCA CCAAAATCGC TCCCAAACTG GGGGATAAAA AAGACAGTGT TGATCACCTG
CAACTGCCTA AATGGCTGCA TATTTTCCAC GACAGCATCG CTGCCACCGC GATTGTGATG
ACGGTGTTCT TCGGCATCAT TCTGCTCTCT TTCGGTCTGG ATAATCTGCA AGAGATGGCG
GGCTCCACCC ACTGGACTAT CTACATCCTC GAAACGGGCC TTAAGTTTGC CGTCGCGATC
CAAGTGATTG TGGCCGGTGT ACGTATGTTT GTCGCCGAGC TGTCTGAAGC GTTTAAAGGC
ATCTCCGAGC GCGTTATTCC TAATGCTGTG CTCGCGATTG ACTGTGCGGC GATCTACGCC
TTCTCTCCCA ATGCCATGGT GTTTGGCTTT ATGTGGGGCG CACTCGGCCA ATTTGCAGCA
GTCTTAGCCA TGCTGGCGTT TAATGCGCCA ATCATGATCA TCCCCGGCTT CATTCCTATG
TTCTTCTCCA ACGCAACGAT TGGCGTCTTT GCGAACCATT TCGGCGGTTG GAAAGCGGTG
ATGAAGATCT GTTTTGTGAT GGGCATTATC GAAGTGCTCG GCTCTGCATG GGCAATTCAC
CTCTTCACCC AACAAGGCAC CGAATTCAGC GGCTGGATGG GCATGGCCGA CTGGGCTTTG
GTCTTCCCAC CGATTATGCA AGGTTTGTCC GCCTCGAAAC TCTTCTTCTT CGTACTGGTT
GCCCTGGCGT TGGTCTACAT GTTCTTTGCT TCCAAACAGT TACGCGCCGA AGAAGATGCA
CAAGGTAGTA TCACGGTCAG TGACGAGCCG GAAGTGATTG AAGCGGTTGA ACAAGCTCTA
CAAGCTGCGC AAGGCACTCG TCCAGTGAGC ATTCTGGCAG TGTGCGGTAA CGGCCAAGGT
TCATCGATGA TGATGAAGAT GAAAATCGGC AAGTATCTGG AGCAAAAAGG CATTCCACAC
GTGATGGATT CTTGCGCGGT GTCTGATTAC AAATCCAAAC TCGCGACCAC CGACATCATT
GTCTCCTCGA AACACCTCTC AGCCGAGATG GAACCGGGCG AAGGCAAGTT TGTGCTCGGG
GTGCAGAACA TGCTGAACCC GAATTCCTTT GGCAATGAAC TGCTCGACAT TATCCATAAC
CATTTTGTGA AAATTCGCTA G
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| Protein sequence | MEFLYDVFYI FYSQVMTKAP LLLGLVTLIG YWLLRRDATT IIKGSIKTIV GFMLVQVGAG
TLVAGFKPVI EKLSQYHGLT GSVIDPYTSM MATMETMGDN YSWVGYAVLL ALAINILLVL
FRRYTGIRTI MLTGHIMFQQ AGLIAVFYFV LGAGMWETII YSAVLMALYW GISSNIMFKP
TEEVTGGAGF SIGHQQQVAS WIATKIAPKL GDKKDSVDHL QLPKWLHIFH DSIAATAIVM
TVFFGIILLS FGLDNLQEMA GSTHWTIYIL ETGLKFAVAI QVIVAGVRMF VAELSEAFKG
ISERVIPNAV LAIDCAAIYA FSPNAMVFGF MWGALGQFAA VLAMLAFNAP IMIIPGFIPM
FFSNATIGVF ANHFGGWKAV MKICFVMGII EVLGSAWAIH LFTQQGTEFS GWMGMADWAL
VFPPIMQGLS ASKLFFFVLV ALALVYMFFA SKQLRAEEDA QGSITVSDEP EVIEAVEQAL
QAAQGTRPVS ILAVCGNGQG SSMMMKMKIG KYLEQKGIPH VMDSCAVSDY KSKLATTDII
VSSKHLSAEM EPGEGKFVLG VQNMLNPNSF GNELLDIIHN HFVKIR
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