26 homologs were found in PanDaTox collection
for query gene Hhal_0627 on replicon NC_008789
Organism: Halorhodospira halophila SL1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008789  Hhal_0627  CRISPR-associated RAMP Crm2 family protein  100 
 
 
977 aa  1961    Halorhodospira halophila SL1  Bacteria  normal  0.397763  n/a   
 
 
-
 
NC_010483  TRQ2_1026  CRISPR-associated RAMP Crm2 family protein  28.62 
 
 
812 aa  149  3e-34  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_15150  CRISPR-associated protein, Crm2 family  31.98 
 
 
676 aa  113  1.0000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1658  CRISPR-associated RAMP Crm2 family protein  25.74 
 
 
731 aa  107  1e-21  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0263  CRISPR-associated Cmr2 family protein  28.67 
 
 
629 aa  94.7  7e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0316  CRISPR-associated protein, Crm2 family  29.63 
 
 
548 aa  89.4  3e-16  Geobacillus sp. WCH70  Bacteria  normal  0.182847  n/a   
 
 
-
 
NC_008025  Dgeo_0964  CRISPR-associated Cmr2 family protein  27.56 
 
 
477 aa  80.1  0.0000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.662431  normal  0.765777 
 
 
-
 
NC_013946  Mrub_1484  Cmr2 family CRISPR-associated protein  26.64 
 
 
488 aa  73.6  0.00000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.752806  normal  0.296807 
 
 
-
 
NC_013411  GYMC61_1194  CRISPR-associated protein, Crm2 family  31.55 
 
 
546 aa  72.4  0.00000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010730  SYO3AOP1_0658  CRISPR-associated protein, Crm2 family  23.97 
 
 
569 aa  71.6  0.00000000006  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2979  CRISPR-associated protein, Crm2 family  22.9 
 
 
623 aa  71.2  0.00000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.113889 
 
 
-
 
NC_014213  Mesil_3380  CRISPR-associated protein, Cmr3  26.29 
 
 
494 aa  70.5  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.879462  normal 
 
 
-
 
NC_008698  Tpen_1316  hypothetical protein  39.39 
 
 
978 aa  68.9  0.0000000005  Thermofilum pendens Hrk 5  Archaea  normal  0.800539  n/a   
 
 
-
 
NC_009972  Haur_0700  CRISPR-associated RAMP Crm2 family protein  28.71 
 
 
616 aa  66.6  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00738894  n/a   
 
 
-
 
NC_010424  Daud_1823  CRISPR-associated RAMP Crm2 family protein  30.38 
 
 
607 aa  66.2  0.000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0649  CRISPR-associated RAMP Crm2 family protein  32.35 
 
 
638 aa  67  0.000000002  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009376  Pars_1118  CRISPR-associated RAMP Crm2 family protein  36.27 
 
 
878 aa  62.8  0.00000003  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_1284  CRISPR-associated Cmr2 family protein  37.63 
 
 
874 aa  60.5  0.0000001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0368664 
 
 
-
 
NC_009654  Mmwyl1_2692  CRISPR-associated RAMP Crm2 family protein  26.49 
 
 
612 aa  60.1  0.0000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_1951  CRISPR-associated protein, Crm2 family  23.45 
 
 
624 aa  59.3  0.0000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1791  CRISPR-associated protein, Crm2 family  25.5 
 
 
637 aa  57.4  0.000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.175791  n/a   
 
 
-
 
NC_007333  Tfu_1578  CRISPR-associated Cmr2 family protein  32.3 
 
 
594 aa  51.2  0.00009  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_1518  hypothetical protein  23.08 
 
 
1045 aa  50.4  0.0001  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_0272  CRISPR-associated Cmr2 family protein  28.83 
 
 
935 aa  50.8  0.0001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009972  Haur_0579  CRISPR-associated RAMP Crm2 family protein  26.32 
 
 
628 aa  47.8  0.001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.638626  n/a   
 
 
-
 
NC_013440  Hoch_1317  CRISPR-associated protein, Crm2 family  24.58 
 
 
650 aa  47.8  0.001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>