| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1316 |
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| Symbol | |
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| ID | 4601996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1261982 |
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| End bp | 1264918 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639774091 |
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| Product | hypothetical protein |
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| Protein accession | YP_920716 |
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| Protein GI | 119720221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.800539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGGCG TGTACTCGAG CATCGGGGAG CTACTGGAGG TGAAGACCGC CGCCCTGCTG
TACGAGCCGC CGTGGAAGGC CTTCGCGCAG CTGAAGAAGG CGCCGCTACT GCCCTGGGCG
AAGCGGGGGG CGGGGCACTG GGAGGCGGAC GCCCTCGCGG TGGCGGAGAG GCTGGGGCTC
GCGGAGGTCC TCGAGAGGAG GCTCGGGGAG GTGAAGGAGC TCGCCCGCCT GGCGCTCGGC
GCCGAGCCGC TCGTGCTCGA CGGGGCAGGC GTGCAGCCGC CGGAGAGGCT CGTGCTCCTG
AACGTGTTCG ACCCGGACGT GTGCCTCGAC CCGGGCAACG GCTGCGACCT CAGGGCGTAC
GCGCGGACAG TGGAGTCCGC CGCCCCGGCC TTCGCGGAGA GCCTCGCGAA CGCTCTCTCA
GGCCTGGGGG ACGCGGCCCT GAGGTACCAC GCGCTCTGGT TCCTCCTGGA GCCGCTCTGG
TTCCGCGCGT GCGGCGCGCC CGTCGTATCG CCGGCCGACC CGAGGTTCCC GGTGTACACG
GTCTTCGACC ACGTCTACGC GGCGGCCACG CTCGCGAACG CCTTCAGGGG CGGCTCCTTC
AGGGGCTACG TGGTCGTCGT GGACTACGCG GGGGTCCAGG AGTACATCTC CAAGGCCAGG
AAGGCCCTCG ACCTCTGGGC CTCCTCGTGG GTAGCCTCGC TCGTCACGTG GGCCACCGTC
CAGCCGTTCG TCGAGCTCCT GGGGCCAGAC GTCGTCGTGA CGCCCTCGCT GAGGGGGAAC
TGGTTCTACG CGGCGTGGCT CCTCGGAAGG CTCAGGGGCA CCGGGGCCTA CGGGGCGGCC
AGGGAGGCGG CGAGGCTCGC GTACGGCTAC TCGGGCTTCC CGAGGCACCC GATAATGCCC
ACGCGCGCTG TGCTCTTCCT CCCGGAGGTT CCCGGGGCCC TCGAGGACGC CCTGCGCGAC
GAGGCCTCGC TTAGGGGCTT CATAGAGAGG AAGGCCTCCG AGGCCTGGTC CAAGGCGGTC
GGAGCCGTCC TCTCCGAGGG GAGGCTGGGC GCGCTGCTCG GCGAGACCCT CAGGGCGAAC
GGGGTCGAGG CAGACGCCTC GGAGCTGGAG GAGTACGTCG AGAGCGTCGC CTCGACGCTA
CCGCTCCCGC AGAGGCTCAT AGTGTTCAGG CACGGGGAGT CCTACGCTAG GTACAGGGAG
TGGCTGGGCA GGGTGTTCGG CGGGGAGCCC GCGGCGGAGG CGGGCGGCGC CAGGGTATCG
CTCGACGAGC GGGCGCTCTA CTTCCACTAC CTCATGGACG AGTACATCCC GTCGGAGGAG
GCCCTGTGGA AGCTGAGCAG GGTGGACCCG GACGTCGAGG CCCAGTCGAG CCGATGGTGC
GGCGCGGCGG CCGAGGTCTT CGGCAGGCTC GGCTTCTGCA GCGTGTGCGG CGAGAGGCCG
GCCGTGGTCG GGGCGCCGTC CAGCAGGTAC GGGGGGCTCG GCCCCGAGTC TAGGAGGGTC
GTGACGGAGG GCGAGAGGCT CTGCCCGAGG TGCCTCGCGA AGAGGCTGGT AGCCCTCAAC
CCCTTCGCCG CGCTGAGGGC CGTCGGGGTC CCGGCGGCGA GGACGTTCTG GTCCGTCCCC
ACGACGAACG AGCTCGCGAA CGCGGAGGTA GCGGAGGAGC ACCTGGACAG GGTCCTCGAC
GTGGTCGAGA GGCACCGGGA GGCCGTGGCG AAGGTCCTCG CGGGCTTCCA GTGGGACCAC
GAGTACTACT CGCGGAGGCT CGCGCGGAGG GCCTACAGGA GGGCCGGCAG GGAGGTCGCG
CTCGTCGCGC TCAGGCTGCT CGCAGCCCTC ATCGAGGCGG CGACGGAGCA GGAGTACAGG
GAGAGGTTCG CGAAAGCCCT GGACGCGCTC GGGGATGGGG AGGCGCGCAG GGAGATCGAG
GAGCTGTTCA GGTCCATAGC CGGGAAGAGG AGGACGCGGC TCGCCGTGGT GAAGGGGGAC
GGGGACTACG CGGGGTCCAG GCTGCTCCGG GCGAGGCTGC GGCTCGGCGC GGGGGAGTAC
GCGGGCAGGG TCGCGGCGCA GGCCGGGCTC GGGGGCGGGG CGGCGGAGCT ACTCGCGAGC
GTAGCCGGGA GGCTCGGCTC GACCGTCACG CTCTCACCCC TCTACACCGC CTCGGCGTCC
AGGTCGCTCA GCCACGGCGC CGTCCTAGAC GCACGCGCGG TCGAGGGGCT GGGGGGCTTC
GTGGTCTACG CGGGCGGGGA CGACCTGCTC GCGCTGACGC CTGCGACGGC CGGCGGGAGG
TACGTGGCGC TGGAAGCCGC CCTCAGGACC CGCAGGGGCT ACTGGGGGGA GCGCGGGAGG
GGGCCGAGGG GCTTCCACGC GTCGCCCGGA ATCCCGCTCG TCTCGCCCGC CCCCAGGAGC
TACGGAAGGT CGTACGCGGT GCTCTCGATC CACTACAGGG ACCCGCTCAG CGCGGCCGTG
GCGAGGTCGT CCGAGATGCT CGAAGAGGCG AAGGCTTGCA CCGCGGTGTA CGGGCCCGCA
ACCGTCGAGA GGGACGCCGT CCGGCTAGAG GACCTCAGGT CCGGCTCCTC CGCGATGCTA
CCCTTCAGGG CGGGGCCCGG CGCCGGGCTG GCCGGGAGCC CCGTTTGGAA GGCCGCGCTA
CTGGCCTCCA TGGAGCTACG CGGGGAGGTC TCGTCGAGCC TCTTCTACGA CTTCTTCTCG
TGGCGCTTCG ACGAGCTCGT GGAGAGGCTC GCCGCCGAGT CGAGGACGCG CGAGGCGTGG
CTCGCCCTGC GCTACCTGGT CTCCAGGAAC ACCAGGAGGA ACCCCGACGA GGTGGCGGGG
AGGGTGCTGG GCGAGGAGCT TGTAGCGGCT AGGCTCAGGT CGGCGGACGG GAGGGAGGAG
AGCCTCGCAA CCCTGGTGCT CCGGGCCGCC AAGGCGCTCA AGAGGATGGA GGGGTGA
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| Protein sequence | MRGVYSSIGE LLEVKTAALL YEPPWKAFAQ LKKAPLLPWA KRGAGHWEAD ALAVAERLGL
AEVLERRLGE VKELARLALG AEPLVLDGAG VQPPERLVLL NVFDPDVCLD PGNGCDLRAY
ARTVESAAPA FAESLANALS GLGDAALRYH ALWFLLEPLW FRACGAPVVS PADPRFPVYT
VFDHVYAAAT LANAFRGGSF RGYVVVVDYA GVQEYISKAR KALDLWASSW VASLVTWATV
QPFVELLGPD VVVTPSLRGN WFYAAWLLGR LRGTGAYGAA REAARLAYGY SGFPRHPIMP
TRAVLFLPEV PGALEDALRD EASLRGFIER KASEAWSKAV GAVLSEGRLG ALLGETLRAN
GVEADASELE EYVESVASTL PLPQRLIVFR HGESYARYRE WLGRVFGGEP AAEAGGARVS
LDERALYFHY LMDEYIPSEE ALWKLSRVDP DVEAQSSRWC GAAAEVFGRL GFCSVCGERP
AVVGAPSSRY GGLGPESRRV VTEGERLCPR CLAKRLVALN PFAALRAVGV PAARTFWSVP
TTNELANAEV AEEHLDRVLD VVERHREAVA KVLAGFQWDH EYYSRRLARR AYRRAGREVA
LVALRLLAAL IEAATEQEYR ERFAKALDAL GDGEARREIE ELFRSIAGKR RTRLAVVKGD
GDYAGSRLLR ARLRLGAGEY AGRVAAQAGL GGGAAELLAS VAGRLGSTVT LSPLYTASAS
RSLSHGAVLD ARAVEGLGGF VVYAGGDDLL ALTPATAGGR YVALEAALRT RRGYWGERGR
GPRGFHASPG IPLVSPAPRS YGRSYAVLSI HYRDPLSAAV ARSSEMLEEA KACTAVYGPA
TVERDAVRLE DLRSGSSAML PFRAGPGAGL AGSPVWKAAL LASMELRGEV SSSLFYDFFS
WRFDELVERL AAESRTREAW LALRYLVSRN TRRNPDEVAG RVLGEELVAA RLRSADGREE
SLATLVLRAA KALKRMEG
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