| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1284 |
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| Symbol | |
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| ID | 4908385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1195325 |
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| End bp | 1197949 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125037 |
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| Product | CRISPR-associated Cmr2 family protein |
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| Protein accession | YP_001056174 |
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| Protein GI | 126459896 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0368664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTGGT TTTTAAAATC ATTTGCACTA CTCCACGACC CGCCGCACAA GGCCCTGTGG
TTCGAGGACG CGGACTACCG GGTCTACGAC AAAAACAGCC ACGAAGAGGA GGCCGCGAAG
CTCTTCGACG AAATTTTCAA GGGCATGGGC TTCGGCGGAG TTCCAGGGAG CGAAGAGAGC
GCGGCCGTGG CCGAGGCCGA CCGCCTCGCC GCGTCTTTTG ACCGGTGGGC CCTCCCCCCG
AGCCCGGGCA ACTACTGGGT GAAGGCCAAG TACATGATAA ACCCCTTTGG CCGAGAGCGG
AGAGAAATCA AGAAGCCGAC CCCCCAGGAG TTTAGGGAGA GGCTGGGGAA GTTCGTGGGG
GAGGTGAGGA GGGTGCTGGA GGCGGCGAAG GGCGACGAGA GGTGGCTCTA CTTCGCATTC
TACGCCGCGT ACGAGCTGGC GTGGATTAAG GCCGGCCTGC CCACGCTACC GGCGGACACA
AGAGTCCCCA CCCACTCCAT CTTCGACCAC CTCTACGCCA CCGCCTCTAT GTTGAACTGG
ACGAGGGGCG GGGGGTGCCT AATGGTGGTA GATCTGCCGG GCATCCAGTC TATCTTGAAG
TCTGCGCGTA AGGCTGGGGA CTACCGCGCC GGGAGCCTCC TAGTCTCCCT CGTGGCCTGG
CGCGTCGCGT GGCGGTTTAT GGAGAGACAC GGGCCCGACA TCCTGCTCTC CCCAACGCCG
CGCTTCAACC CGCTCTTCTA CGCCCAGCTC GACAGAAGGG TAAAGGGAGT GTGGGGGCTA
TACGCCGGGG CCATGTCCTA CTACGTGGGA AAGAAGTTCG GCGTAAGCCA GCAATTGCCA
GTGGACGAAT GGCTCCACGG GTTGATTAGA AGGTCGTCGC TGTTCCCCGG CACTCTCTAC
CTCGCCCTGC CGGAGTGCAA GGGGGAAGAC GAGGCCTACT CCTACTTCGA CGAGGTTTTA
AAAGAGGTGT TGGAGGCCGC TAGGGGAGGG GAGGCGCCAA ACCTCCCCTT TGACCTAGGG
GGGCTAGATG ATGGCGTAAA GAGGGTCGTG GAGGCGGGGC TCAAGGGCCT GGAGTCGGTA
CGTTATCTCC CCATCAGAGT CGCAGTTGCG TATGTGGAAG AGGGTCTGAG AAATCTCGAG
AAGTGGACGA CGGAGAGGTT CGGCATAGAC GATGAGGTGA AGAAGCTACT AGGCGGGGAC
TTAAGGAGGT TTCTCTTTGC CAGGCTGTTG GAGATGGTCA ACGAGAGAAA GAGGAGGGCC
CTGCCGAAGT ACCCCAGCTG GTTCGACAAG GAGGGTCGGC CGAGGTTCTC TCAGACCTAT
AAGGGAACTT GGATGCACAG TAGCCTTGAC CCAAGCCAGC CCGCCGTGGT GAAATTCGGC
GGCGTGTTTA AAGACGGCAA TTTGACATAC GACGACGAGA CACATAGCTG GCTCAAGTCG
CTGGGAATTG AAGAGAAAAA AGACGCAAAC TTGACTAAGG TGTTTAAGCC GAAGGAGGCG
CTGGGCCCCG TGGACCTGAT AAAGAGGGCG CTCTACCTCA GATCTGCCAA GAGAGCTGGC
ATTGACTCTG TGGAAGTGGT AGCGCTCAAC TACTACTACC TTAAGCATTA TTTCGACAGT
GAAAGGTGTC GAGAGATCAA GGGGCTTGTG GAGAGAGTCT TAGACGGTGA AGATGTTGAG
GACGTCTTCG GCTCCTCCGA GGCGGCGGAT AGGCGGCTGG CCGAGTGTAA GGGGGCTGGA
GAAGAGCCTT GGACGCCGGG GCTTGAGTAC GTCGTTATTA GGGCAGATGG GGACAACGTG
GGCAAGCTTC TCAGGGGGTG TCTGCCTAAG GAGCCGCAGA TGCCCCAAGA CGTGGAAGTC
GTGAGAGACA GGGAACAGTT TGAAAAAGAT ATGAAGCACG CGTTGAGAGT TCTTGGAGCT
ATGCGCGAGA CCGCGAAGCA CATCTGCGGT GGGGGCTACC TAGTTGTTCC AAGCCCGGCC
TACTACGCCG CTGTTTCTGC GGCGCTTATG GTCACAGCCA TAGGCGACGC CGCCATTGTG
GAAAAAAGCC AGGGAGAGCT GGTCTTCGCC GGGGGCGACG ACTTGCTGGC CTTCTCGGCT
AAGCCCCCCT CGTTTGACAT TGTAAAGGAG ACTAGAGAGA ACTACTGGGG GGAGGGGGGC
TTCCACTCGT TGTCGGAGAG CTACTTCCTC CCCGCCCTCA CCGCATATGG CAGAAGCTAC
TCGCTTAGGG TTGCCCACGC GGTGACAGAC ATGATGTCTG TGGAGGTGGA CAAGGCGGCT
GAGTTGCTCG ACGAGGCGAA GGATAGGGTG CCGGGCAAAG ACGCCTTGGC TATCTCCACC
TCTACGGGCC ACGTGGGGTT TACCAAGGTG AGCGCGGTGG GGAGCGTTAA GGCAATCGCC
GAGGCCTACG CCAGGAGGAC TCTCGGCAGA AATCTGCCCT ACGACGTCGA GGCGTGGGGA
GAGGCGGCGG AGGTGGAGTA CGTCCTGCGG TACTTGGTAG GCAGAAACAC GGACAAGAAG
GAGCTCGCCG ACAAGGTGGT GGAGGCGGCG TGCTACGTAG ATGGGCGCGG GGAGAAGTGG
AAGAACGCCG TCGAGCTACT GAAGGCTCTT AGGGCGTGGA TATGA
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| Protein sequence | MNWFLKSFAL LHDPPHKALW FEDADYRVYD KNSHEEEAAK LFDEIFKGMG FGGVPGSEES
AAVAEADRLA ASFDRWALPP SPGNYWVKAK YMINPFGRER REIKKPTPQE FRERLGKFVG
EVRRVLEAAK GDERWLYFAF YAAYELAWIK AGLPTLPADT RVPTHSIFDH LYATASMLNW
TRGGGCLMVV DLPGIQSILK SARKAGDYRA GSLLVSLVAW RVAWRFMERH GPDILLSPTP
RFNPLFYAQL DRRVKGVWGL YAGAMSYYVG KKFGVSQQLP VDEWLHGLIR RSSLFPGTLY
LALPECKGED EAYSYFDEVL KEVLEAARGG EAPNLPFDLG GLDDGVKRVV EAGLKGLESV
RYLPIRVAVA YVEEGLRNLE KWTTERFGID DEVKKLLGGD LRRFLFARLL EMVNERKRRA
LPKYPSWFDK EGRPRFSQTY KGTWMHSSLD PSQPAVVKFG GVFKDGNLTY DDETHSWLKS
LGIEEKKDAN LTKVFKPKEA LGPVDLIKRA LYLRSAKRAG IDSVEVVALN YYYLKHYFDS
ERCREIKGLV ERVLDGEDVE DVFGSSEAAD RRLAECKGAG EEPWTPGLEY VVIRADGDNV
GKLLRGCLPK EPQMPQDVEV VRDREQFEKD MKHALRVLGA MRETAKHICG GGYLVVPSPA
YYAAVSAALM VTAIGDAAIV EKSQGELVFA GGDDLLAFSA KPPSFDIVKE TRENYWGEGG
FHSLSESYFL PALTAYGRSY SLRVAHAVTD MMSVEVDKAA ELLDEAKDRV PGKDALAIST
STGHVGFTKV SAVGSVKAIA EAYARRTLGR NLPYDVEAWG EAAEVEYVLR YLVGRNTDKK
ELADKVVEAA CYVDGRGEKW KNAVELLKAL RAWI
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