| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3380 |
|---|
| Symbol | |
|---|
| ID | 9252910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014213 |
|---|
| Strand | - |
|---|
| Start bp | 192458 |
|---|
| End bp | 193942 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | CRISPR-associated protein, Cmr3 |
|---|
| Protein accession | YP_003686700 |
|---|
| Protein GI | 297567729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.879462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACC TGCTCTCCAT CTCCCTGGGC CCGGTGCAAG ACTTCATTGC CGCCGCGCGC
CGCACCGCCG ACCTGTACGC GGGTTCGCAG ATTTTGCAGG AACTGAGCAA GCACGCGGCT
CAGTTTTTGC ACAATAAAGG TGCCCAACTT ATCTTCCCCG CTGACCCGAA CGCCGACGGG
GCCAACAAGA TTCTGGCCGA GGTAAAGGAC GACCCTAAGC AGCTTGCCGT GGAGACCAAA
AAAGCCGTTC AGGAGAGGCT CTTGAGGCTC TGGGACGAGA CCATTCGCAA GCTCCCTGCC
GAGCAGCGAA ACCTGATTGA CCAAGCAAGG GCCCAAGAGC AGCTTGGGCG TTTCCTCGAG
TTCTACGCCG CCTGGGCGCC GCTGCCCAAA AAGGAAGCCT ACAAGGAGGC AAGGCTTCAG
GTGGAGCGCC TCTTGGCCGG ACGCAAGGCT TTGCGGGATT TTGCCCCCAC CCAGCAACAC
GACGCCGGTG TGCCCAAGTC TCCCCTCGAC CCCTCCTGGG CAGCGGTGAT AGATCCTCGA
CAGTGGGCCA CTGCCAGCAT CCGTCTAGCC GATGGCTCCC ACCGCCCCCT GCGTATTAAG
CCCACCGAGC ACCTCGACGC CATCTCGCTA TTCAAGCGCT GTTACGGGGT GCTGAACTCG
GACAAAGTGG TGGATACCCG CACCATGGCC CGGCGCTCCT GGAGGCCGGA AGCAGAGCCC
GACGAGCGCT ACGGCGAGGA CGACGACCAT ATCCCAGAGC CCCAGCCCTA CCTGGCCATT
CTGGTGGCCG ACGGCGACCG CATGGGCGAG CTGATTGCCC GCCAGGACGA CCCCGATGCC
CACCGTGGGC TATCAAAAAC CCTGGATGAC TTCGCCAAGG AAGCCCGCAC AATTGTGCCC
AAGCACAGGG GCTTTATGGT CTATTCGGGC GGGGACGACG TGCTGGCCCT CCTGCCAGTG
AACCAAGCCA TCGCCTGCGC CAAAGAACTC TCGGAGGCGT TTCGCCACCG GGTCAAGGGC
ACCCTTTCGG CGGGGGTTGC CATTGTGCAC TACCGCGAGC CGCTCTCCGT TTCCCTGCAA
AATGCGCGGG ATGCGGAGAA AGCCGCTAAG AACGGTGGAC GGAATGCACT CGCCGTAGCC
CTGCACACCC GTGGCGGCTC GCCGGTCACG GTGGTGCAGC CCTGGAACGA GCTGTCCTGG
GACGAGCTGC TCGAGGCCTA CCAAAATCGC CAGATTACTC GCGGCTTCGC GCACGAACTC
CGGGACTTGG TGCAGGAGTG GCAGGACGAC ATGCGGGCCG ATTATCTCCA TAAGGAAGCC
CTGCGGGTTC TGGCCCGCAA AGAGGCCCAT GATCTGCGAA TTCCAGCACC CACCAGCGAC
ACCCCCACGT ACCGCAAAGC CCTGCTTCGC TTTGTGGATC AGCTCATCAT TGCGCGCTTT
TTGAGCGGCA TTCGGGAGGA AGAGCATGCC GGAAAGAGTG CTTGA
|
|---|
| Protein sequence | MSHLLSISLG PVQDFIAAAR RTADLYAGSQ ILQELSKHAA QFLHNKGAQL IFPADPNADG
ANKILAEVKD DPKQLAVETK KAVQERLLRL WDETIRKLPA EQRNLIDQAR AQEQLGRFLE
FYAAWAPLPK KEAYKEARLQ VERLLAGRKA LRDFAPTQQH DAGVPKSPLD PSWAAVIDPR
QWATASIRLA DGSHRPLRIK PTEHLDAISL FKRCYGVLNS DKVVDTRTMA RRSWRPEAEP
DERYGEDDDH IPEPQPYLAI LVADGDRMGE LIARQDDPDA HRGLSKTLDD FAKEARTIVP
KHRGFMVYSG GDDVLALLPV NQAIACAKEL SEAFRHRVKG TLSAGVAIVH YREPLSVSLQ
NARDAEKAAK NGGRNALAVA LHTRGGSPVT VVQPWNELSW DELLEAYQNR QITRGFAHEL
RDLVQEWQDD MRADYLHKEA LRVLARKEAH DLRIPAPTSD TPTYRKALLR FVDQLIIARF
LSGIREEEHA GKSA
|
|---|
| |