13 homologs were found in PanDaTox collection
for query gene HMPREF0424_0194 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_0194  toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein  100 
 
 		 116 aa  239  1e-62  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
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NC_013170  Ccur_10640  hypothetical protein  44.87 
 
 		 78 aa  72  0.000000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
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NC_008639  Cpha266_1377  CopG family transcriptional regulator  40.54 
 
 		 74 aa  58.9  0.00000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
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NC_011059  Paes_2095  CopG domain protein DNA-binding domain protein  40.54 
 
 		 82 aa  58.2  0.00000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
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NC_010803  Clim_1339  CopG domain protein DNA-binding domain protein  39.19 
 
 		 82 aa  57.4  0.00000007  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
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NC_007643  Rru_A3195  helix-turn-helix protein, CopG  38.67 
 
 		 74 aa  51.6  0.000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
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NC_007515  Gmet_A3570  CopG-like DNA-binding protein  36.62 
 
 		 74 aa  48.5  0.00003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00677722  n/a   
 
 
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NC_013169  Ksed_24260  predicted DNA-binding protein with an HTH domain  33.33 
 
 		 77 aa  46.2  0.0001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.322947  normal  1 
 
 
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NC_009719  Plav_1616  CopG/DNA-binding domain-containing protein  39.19 
 
 		 75 aa  44.7  0.0004  Parvibaculum lavamentivorans DS-1  Bacteria  decreased coverage  0.000000000000428775  normal  1 
 
 
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NC_013946  Mrub_0379  CopG domain-containing protein DNA-binding domain-containing protein  33.78 
 
 		 70 aa  45.1  0.0004  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
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NC_007614  Nmul_A0599  helix-turn-helix protein, CopG  33.78 
 
 		 75 aa  43.1  0.001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
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NC_011901  Tgr7_3232  hypothetical protein  34.29 
 
 		 75 aa  42.7  0.001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.706269  n/a   
 
 
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NC_013422  Hneap_1626  CopG domain protein DNA-binding domain protein  34.72 
 
 		 74 aa  43.5  0.001  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00111778  n/a   
 
 
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