Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1616 |
Symbol | |
ID | 5455366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1752237 |
End bp | 1752464 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640877189 |
Product | CopG/DNA-binding domain-containing protein |
Protein accession | YP_001412892 |
Protein GI | 154252068 |
COG category | [R] General function prediction only |
COG ID | [COG4710] Predicted DNA-binding protein with an HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000428775 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCT CTGTCCGCCT CGATGCAGAA CTGGAAGCGC GTCTCGATCT TCTCGCGAAG AAGACGGGGC GCACCCGCGC CTATTATCTG CGCGAGATCA TCGAGCGGGG GCTCGACGAG ATGGAAGACT ATTATCTCGC CGCCGACGTG CTGGAGCGTG TCCGCAAGGG CGAGGAAAAA ACGCATTCCG CGGCCAAGGT GAGAAAAGAC CTTGGCCTGG ACGATTGA
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Protein sequence | MPTSVRLDAE LEARLDLLAK KTGRTRAYYL REIIERGLDE MEDYYLAADV LERVRKGEEK THSAAKVRKD LGLDD
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