20 homologs were found in PanDaTox collection
for query gene Tgr7_3232 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_3232  hypothetical protein  100 
 
 
75 aa  150  5.9999999999999996e-36  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.706269  n/a   
 
 
-
 
NC_011059  Paes_2095  CopG domain protein DNA-binding domain protein  59.72 
 
 
82 aa  82.4  0.000000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1339  CopG domain protein DNA-binding domain protein  59.7 
 
 
82 aa  80.9  0.000000000000006  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1377  CopG family transcriptional regulator  62.5 
 
 
74 aa  79.7  0.00000000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009036  Sbal_4391  helix-turn-helix protein, CopG  54.93 
 
 
74 aa  73.9  0.0000000000007  Shewanella baltica OS155  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1616  CopG/DNA-binding domain-containing protein  54.79 
 
 
75 aa  71.2  0.000000000005  Parvibaculum lavamentivorans DS-1  Bacteria  decreased coverage  0.000000000000428775  normal 
 
 
-
 
NC_007614  Nmul_A0599  helix-turn-helix protein, CopG  51.43 
 
 
75 aa  70.9  0.000000000006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1291  anti-toxin protein  47.95 
 
 
96 aa  70.1  0.00000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1260  CopG/DNA-binding domain-containing protein  47.95 
 
 
83 aa  70.1  0.00000000001  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007515  Gmet_A3570  CopG-like DNA-binding protein  54.69 
 
 
74 aa  68.2  0.00000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00677722  n/a   
 
 
-
 
NC_013422  Hneap_1626  CopG domain protein DNA-binding domain protein  56.72 
 
 
74 aa  67.8  0.00000000004  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00111778  n/a   
 
 
-
 
NC_007643  Rru_A3195  helix-turn-helix protein, CopG  52.94 
 
 
74 aa  68.2  0.00000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1569  CopG domain protein DNA-binding domain protein  55.56 
 
 
73 aa  66.2  0.0000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0379  CopG domain-containing protein DNA-binding domain-containing protein  56.6 
 
 
70 aa  59.3  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_24260  predicted DNA-binding protein with an HTH domain  43.42 
 
 
77 aa  54.7  0.0000005  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.322947  normal 
 
 
-
 
NC_011061  Paes_2403  CopG domain protein DNA-binding domain protein  52 
 
 
73 aa  52.4  0.000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0194  toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein  34.29 
 
 
116 aa  42.7  0.001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008787  CJJ81176_1238  hypothetical protein  36.36 
 
 
82 aa  40.8  0.007  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  decreased coverage  0.00000000115747  n/a   
 
 
-
 
NC_003912  CJE1360  hypothetical protein  36.36 
 
 
82 aa  40.8  0.007  Campylobacter jejuni RM1221  Bacteria  normal  0.937532  n/a   
 
 
-
 
NC_011060  Ppha_1271  CopG domain protein DNA-binding domain protein  26.03 
 
 
72 aa  40.4  0.008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
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