| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0194 |
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| Symbol | |
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| ID | 8709211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 217104 |
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| End bp | 217454 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482313 |
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| Product | toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein |
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| Protein accession | YP_003373458 |
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| Protein GI | 283782704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4710] Predicted DNA-binding protein with an HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTACA GTCTAGCGTT ACCGCGCGAT GCTTCGCGAT TACAACCCAT TGGATTGCAT
TATTCTGAGT GTAAGGTAAT ATATGTTTTA CACGTTTTAC ATTGGAGATT AAAAATGGTC
GCAACAATTA CAGGATTAAG AGTACCCTCT AACGTTTTAG ATCGTTATGA TCAGCTCGCT
AAAACCACTC ACCGCACCCG TTCATTTTAC ATGAATCAAG CACTAGAAGC TCAAATTGAT
GAACTTGAAC ATGAATATGG TCTAATGGCA GATATTGAAG CATACAAACG TGGAGAGTTA
GAAACATCCC CACTCGACGA CGTGGTGAAG CGCCTTGATT TGGAAGATTA A
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| Protein sequence | MVYSLALPRD ASRLQPIGLH YSECKVIYVL HVLHWRLKMV ATITGLRVPS NVLDRYDQLA
KTTHRTRSFY MNQALEAQID ELEHEYGLMA DIEAYKRGEL ETSPLDDVVK RLDLED
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