12 homologs were found in PanDaTox collection
for query gene Gmet_A3568 on replicon NC_007515
Organism: Geobacter metallireducens GS-15



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007515  Gmet_A3568  hypothetical protein  100 
 
 
113 aa  229  1e-59  Geobacter metallireducens GS-15  Bacteria  normal  0.811641  n/a   
 
 
-
 
NC_008762  Pnap_4990  hypothetical protein  58.04 
 
 
154 aa  134  5e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3180  hypothetical protein  56 
 
 
152 aa  118  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  0.588168  hitchhiker  0.000000131612 
 
 
-
 
NC_010627  Bphy_7599  hypothetical protein  51.49 
 
 
152 aa  112  2.0000000000000002e-24  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0821  RelB/DinJ family addiction module antitoxin  46.08 
 
 
146 aa  105  2e-22  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.83996 
 
 
-
 
NC_011366  Rleg2_5983  hypothetical protein  46.6 
 
 
153 aa  105  2e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_7133  hypothetical protein  50 
 
 
154 aa  99.4  1e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.233753 
 
 
-
 
NC_008060  Bcen_2916  hypothetical protein  47.78 
 
 
153 aa  92.8  1e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0139  hypothetical protein  47.78 
 
 
153 aa  92.8  1e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4957  hypothetical protein  42.72 
 
 
147 aa  93.2  1e-18  Pseudomonas putida W619  Bacteria  normal  0.878072  hitchhiker  0.000117069 
 
 
-
 
NC_010551  BamMC406_0139  hypothetical protein  46.67 
 
 
153 aa  92.8  1e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  0.882218  normal 
 
 
-
 
NC_007483  Noc_A0040  hypothetical protein  30.77 
 
 
92 aa  55.8  0.0000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0861806  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>