141 homologs were found in PanDaTox collection
for query gene Gdia_3142 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_3142  sugar isomerase (SIS)  100 
 
 
316 aa  611  9.999999999999999e-175  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.107968 
 
 
-
 
NC_011757  Mchl_4696  N-acetylmuramic acid-6-phosphate etherase  53.57 
 
 
295 aa  266  2.9999999999999995e-70  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4327  N-acetylmuramic acid-6-phosphate etherase  53.57 
 
 
295 aa  256  4e-67  Methylobacterium extorquens PA1  Bacteria  normal  0.575579  normal 
 
 
-
 
NC_010725  Mpop_4844  N-acetylmuramic acid-6-phosphate etherase  55.71 
 
 
307 aa  256  5e-67  Methylobacterium populi BJ001  Bacteria  normal  0.593356  normal 
 
 
-
 
NC_011894  Mnod_1602  N-acetylmuramic acid-6-phosphate etherase  55.24 
 
 
303 aa  251  9.000000000000001e-66  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2465  glucokinase regulatory-like protein  49.49 
 
 
299 aa  243  3e-63  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2865  N-acetylmuramic acid-6-phosphate etherase  50.34 
 
 
297 aa  239  4e-62  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0496  N-acetylmuramic acid-6-phosphate etherase  56.45 
 
 
299 aa  233  3e-60  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.000201517 
 
 
-
 
NC_013440  Hoch_1474  sugar isomerase (SIS)  49.64 
 
 
326 aa  231  8.000000000000001e-60  Haliangium ochraceum DSM 14365  Bacteria  normal  0.35979  normal 
 
 
-
 
NC_008010  Dgeo_2507  N-acetylmuramic acid-6-phosphate etherase  53 
 
 
305 aa  226  5.0000000000000005e-58  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2591  sugar isomerase (SIS)  51.57 
 
 
290 aa  217  2e-55  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1143  N-acetylmuramic acid-6-phosphate etherase  44.1 
 
 
295 aa  211  1e-53  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3619  N-acetylmuramic acid-6-phosphate etherase  44.1 
 
 
295 aa  211  1e-53  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1249  N-acetylmuramic acid-6-phosphate etherase  44.1 
 
 
295 aa  211  1e-53  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.767258  n/a   
 
 
-
 
NC_013525  Tter_1512  glucokinase regulatory-like protein  42.56 
 
 
307 aa  204  2e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A2949  N-acetylmuramic acid-6-phosphate etherase  43.75 
 
 
297 aa  203  3e-51  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2814  N-acetylmuramic acid-6-phosphate etherase  43.75 
 
 
297 aa  202  5e-51  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.728479 
 
 
-
 
NC_008530  LGAS_1857  N-acetylmuramic acid-6-phosphate etherase  42.59 
 
 
297 aa  201  9e-51  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000411565  hitchhiker  0.0000000817589 
 
 
-
 
NC_011080  SNSL254_A2774  N-acetylmuramic acid-6-phosphate etherase  43.75 
 
 
297 aa  201  9.999999999999999e-51  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2837  N-acetylmuramic acid-6-phosphate etherase  43.75 
 
 
297 aa  201  9.999999999999999e-51  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.718204 
 
 
-
 
NC_011138  MADE_00595  glucokinase regulatory-like protein  39.38 
 
 
331 aa  200  3e-50  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2733  N-acetylmuramic acid-6-phosphate etherase  43.4 
 
 
297 aa  200  3e-50  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3056  N-acetylmuramic acid-6-phosphate etherase  43.94 
 
 
308 aa  199  7e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3047  N-acetylmuramic acid-6-phosphate etherase  42.91 
 
 
297 aa  198  7.999999999999999e-50  Enterobacter sp. 638  Bacteria  normal  normal  0.0580573 
 
 
-
 
NC_013421  Pecwa_1219  N-acetylmuramic acid-6-phosphate etherase  43.06 
 
 
308 aa  198  9e-50  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1899  N-acetylmuramic acid-6-phosphate etherase  35.17 
 
 
295 aa  197  2.0000000000000003e-49  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3833  glucokinase regulatory-like protein  38.89 
 
 
294 aa  197  2.0000000000000003e-49  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3661  N-acetylmuramic acid-6-phosphate etherase  44.44 
 
 
297 aa  196  6e-49  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2813  N-acetylmuramic acid-6-phosphate etherase  40.62 
 
 
295 aa  195  9e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_1241  N-acetylmuramic acid-6-phosphate etherase  36.68 
 
 
297 aa  194  2e-48  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0357447  n/a   
 
 
-
 
NC_013203  Apar_1199  glucokinase regulatory-like protein  39.46 
 
 
297 aa  192  6e-48  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2585  N-acetylmuramic acid-6-phosphate etherase  40.97 
 
 
300 aa  192  8e-48  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3406  N-acetylmuramic acid-6-phosphate etherase  44.67 
 
 
298 aa  192  8e-48  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2753  glucokinase regulatory-like protein  43.34 
 
 
310 aa  191  1e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0176  N-acetylmuramic acid-6-phosphate etherase  37.73 
 
 
298 aa  190  2e-47  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0181  N-acetylmuramic acid-6-phosphate etherase  37.73 
 
 
298 aa  190  2.9999999999999997e-47  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0038  N-acetylmuramic acid-6-phosphate etherase  40.35 
 
 
297 aa  188  9e-47  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2775  N-acetylmuramic acid-6-phosphate etherase  40.97 
 
 
297 aa  188  1e-46  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1121  glucokinase regulatory-like protein  38.95 
 
 
297 aa  187  2e-46  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1260  N-acetylmuramic acid-6-phosphate etherase  38.83 
 
 
300 aa  187  2e-46  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001001  N-acetylmuramic acid 6-phosphate etherase  39.66 
 
 
300 aa  187  2e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1469  N-acetylmuramic acid-6-phosphate etherase  39.58 
 
 
295 aa  187  2e-46  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00569055  n/a   
 
 
-
 
NC_003910  CPS_2881  N-acetylmuramic acid-6-phosphate etherase  39.86 
 
 
308 aa  186  3e-46  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1541  glucokinase regulatory-like protein  37.8 
 
 
291 aa  186  6e-46  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0620  N-acetylmuramic acid-6-phosphate etherase  42.76 
 
 
301 aa  185  7e-46  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4459  N-acetylmuramic acid-6-phosphate etherase  37.85 
 
 
294 aa  185  7e-46  Bacillus cereus G9842  Bacteria  normal  normal  0.772989 
 
 
-
 
NC_009668  Oant_3125  N-acetylmuramic acid-6-phosphate etherase  39.93 
 
 
307 aa  185  8e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.32391  n/a   
 
 
-
 
NC_012912  Dd1591_1079  N-acetylmuramic acid-6-phosphate etherase  42.36 
 
 
313 aa  185  9e-46  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0987  N-acetylmuramic acid-6-phosphate etherase  37.85 
 
 
294 aa  185  9e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0335  N-acetylmuramic acid-6-phosphate etherase  38.06 
 
 
303 aa  184  1.0000000000000001e-45  Haemophilus somnus 129PT  Bacteria  normal  0.130147  n/a   
 
 
-
 
NC_008709  Ping_1065  N-acetylmuramic acid-6-phosphate etherase  36.39 
 
 
299 aa  184  1.0000000000000001e-45  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00989  N-acetylmuramic acid-6-phosphate etherase  38.97 
 
 
308 aa  184  1.0000000000000001e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS0783  N-acetylmuramic acid-6-phosphate etherase  37.85 
 
 
294 aa  184  2.0000000000000003e-45  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0822  N-acetylmuramic acid-6-phosphate etherase  37.85 
 
 
294 aa  184  2.0000000000000003e-45  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.199638  n/a   
 
 
-
 
NC_008009  Acid345_2617  N-acetylmuramic acid-6-phosphate etherase  38.06 
 
 
304 aa  184  2.0000000000000003e-45  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.423001  normal 
 
 
-
 
NC_008228  Patl_4168  N-acetylmuramic acid-6-phosphate etherase  39.58 
 
 
307 aa  184  2.0000000000000003e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.396685  n/a   
 
 
-
 
NC_011725  BCB4264_A0876  N-acetylmuramic acid-6-phosphate etherase  37.5 
 
 
294 aa  184  2.0000000000000003e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0172  N-acetylmuramic acid-6-phosphate etherase  38.28 
 
 
302 aa  183  4.0000000000000006e-45  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0732  N-acetylmuramic acid-6-phosphate etherase  38.49 
 
 
294 aa  182  5.0000000000000004e-45  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.114997  n/a   
 
 
-
 
NC_006274  BCZK0718  N-acetylmuramic acid-6-phosphate etherase  38.49 
 
 
294 aa  182  6e-45  Bacillus cereus E33L  Bacteria  normal  0.188142  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0732  N-acetylmuramic acid-6-phosphate etherase  37.93 
 
 
294 aa  182  7e-45  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0918  N-acetylmuramic acid-6-phosphate etherase  37.85 
 
 
294 aa  182  7e-45  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.20197e-42 
 
 
-
 
NC_009457  VC0395_A0221  N-acetylmuramic acid-6-phosphate etherase  38.89 
 
 
307 aa  182  8.000000000000001e-45  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2583  N-acetylmuramic acid-6-phosphate etherase  39.52 
 
 
298 aa  182  8.000000000000001e-45  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_004409  N-acetylmuramic acid 6-phosphate etherase  39.3 
 
 
309 aa  181  1e-44  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6811  N-acetylmuramic acid-6-phosphate etherase  46.8 
 
 
266 aa  180  2e-44  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00997485  hitchhiker  0.000351646 
 
 
-
 
NC_008043  TM1040_3152  N-acetylmuramic acid-6-phosphate etherase  43.49 
 
 
293 aa  181  2e-44  Ruegeria sp. TM1040  Bacteria  decreased coverage  0.00000249376  normal 
 
 
-
 
NC_008686  Pden_2473  N-acetylmuramic acid-6-phosphate etherase  48.59 
 
 
292 aa  181  2e-44  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.226466 
 
 
-
 
NC_013515  Smon_0973  glucokinase regulatory-like protein  39.13 
 
 
296 aa  180  2e-44  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0485  N-acetylmuramic acid-6-phosphate etherase  36.98 
 
 
298 aa  180  2.9999999999999997e-44  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0913  N-acetylmuramic acid-6-phosphate etherase  37.5 
 
 
294 aa  179  4e-44  Bacillus cereus ATCC 10987  Bacteria  normal  0.163609  n/a   
 
 
-
 
NC_007802  Jann_3803  N-acetylmuramic acid-6-phosphate etherase  43.08 
 
 
316 aa  179  4e-44  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.0010924  decreased coverage  0.000127342 
 
 
-
 
NC_013595  Sros_5694  N-acetylmuramic acid-6-phosphate etherase  42.66 
 
 
305 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.324396  normal 
 
 
-
 
CP001637  EcDH1_1233  glucokinase regulatory-like protein  38.83 
 
 
298 aa  179  7e-44  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2564  N-acetylmuramic acid-6-phosphate etherase  38.83 
 
 
298 aa  179  7e-44  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2714  N-acetylmuramic acid-6-phosphate etherase  38.83 
 
 
298 aa  179  7e-44  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_08691  sugar phosphate isomerase  35.4 
 
 
303 aa  179  7e-44  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.0143494 
 
 
-
 
NC_010468  EcolC_1251  N-acetylmuramic acid-6-phosphate etherase  38.83 
 
 
298 aa  179  7e-44  Escherichia coli ATCC 8739  Bacteria  normal  0.674779  normal  0.258404 
 
 
-
 
CP001509  ECD_02328  N-acetylmuramic acid-6-phosphate etherase  38.83 
 
 
298 aa  178  1e-43  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02289  hypothetical protein  38.83 
 
 
298 aa  178  1e-43  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E2800  N-acetylmuramic acid-6-phosphate etherase  38.83 
 
 
298 aa  178  1e-43  Shigella boydii CDC 3083-94  Bacteria  normal  0.505825  n/a   
 
 
-
 
NC_007333  Tfu_2324  N-acetylmuramic acid-6-phosphate etherase  42.24 
 
 
304 aa  177  2e-43  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0670  N-acetylmuramic acid-6-phosphate etherase  36.81 
 
 
294 aa  177  2e-43  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3658  N-acetylmuramic acid-6-phosphate etherase  39.18 
 
 
298 aa  177  2e-43  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1099  N-acetylmuramic acid-6-phosphate etherase  42.73 
 
 
274 aa  177  3e-43  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.648374 
 
 
-
 
NC_013037  Dfer_3685  N-acetylmuramic acid-6-phosphate etherase  44.1 
 
 
267 aa  176  3e-43  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.137366 
 
 
-
 
NC_013132  Cpin_6538  N-acetylmuramic acid-6-phosphate etherase  44.1 
 
 
270 aa  176  4e-43  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.130206  normal  0.393534 
 
 
-
 
BN001302  ANIA_11038  glucokinase regulator family protein, putative (AFU_orthologue; AFUA_1G17490)  40.54 
 
 
373 aa  175  9e-43  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.515331 
 
 
-
 
NC_007335  PMN2A_0315  N-acetylmuramic acid-6-phosphate etherase  35.76 
 
 
310 aa  174  9.999999999999999e-43  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3065  N-acetylmuramic acid-6-phosphate etherase  42.79 
 
 
270 aa  174  1.9999999999999998e-42  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3780  N-acetylmuramic acid-6-phosphate etherase  44.54 
 
 
268 aa  174  1.9999999999999998e-42  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_09758  glucokinase regulator-related protein  39.32 
 
 
274 aa  173  2.9999999999999996e-42  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.199964  n/a   
 
 
-
 
NC_007413  Ava_0242  N-acetylmuramic acid-6-phosphate etherase  38.38 
 
 
307 aa  172  7.999999999999999e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_35990  N-acetylmuramic acid-6-phosphate etherase  40.89 
 
 
308 aa  172  7.999999999999999e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.065784  normal  0.17675 
 
 
-
 
NC_009441  Fjoh_2490  N-acetylmuramic acid-6-phosphate etherase  42.36 
 
 
270 aa  172  9e-42  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.000000186214  n/a   
 
 
-
 
NC_007802  Jann_1357  N-acetylmuramic acid-6-phosphate etherase  41.58 
 
 
298 aa  170  2e-41  Jannaschia sp. CCS1  Bacteria  normal  normal  0.545728 
 
 
-
 
NC_013730  Slin_5916  glucokinase regulatory-like protein  45.89 
 
 
270 aa  170  3e-41  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4977  N-acetylmuramic acid-6-phosphate etherase  37.11 
 
 
306 aa  169  4e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.889603 
 
 
-
 
NC_008820  P9303_15151  N-acetylmuramic acid-6-phosphate etherase  38.64 
 
 
316 aa  169  7e-41  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.192171 
 
 
-
 
NC_014210  Ndas_0474  sugar isomerase (SIS)  41.67 
 
 
337 aa  168  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.850822  normal 
 
 
-
 
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