Gene Gdia_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3142 
Symbol 
ID6976579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3440178 
End bp3441128 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content75% 
IMG OID643392653 
Productsugar isomerase (SIS) 
Protein accessionYP_002277487 
Protein GI209545258 
COG category[R] General function prediction only 
COG ID[COG2103] Predicted sugar phosphate isomerase 
TIGRFAM ID[TIGR00274] N-acetylmuramic acid 6-phosphate etherase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.107968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCG CCCCGCCGCC GTTCGTTCCC GGGACCGAAG CCTTCAACCC GGCGACCGAG 
GCCCTGGATA CGTGGCCGGT CCCGGTCCAG GTCGCGACGT TGTGGGAGGG ACAGATGAAC
GCGGTGGCGG CCATCCGTCC GGCACTGGCC GCCATCGCGG CGGCGGTCGA GGCCGCCCTG
CCCCGCCTGC GCGCGGGCGG GCGGCTGGCC TATGCCGGCG CCGGCAGTTC GGGCCGGCTG
GCGGCGCAGG ACGGCGCGGA ACTGGAACCG ACCTTCGACT GGCCCGCCGC GCGCACGATC
CTGCTGGTTG CCGGCGGCCC CCGCGCCCTG ACCGAAGCCG TGGAAAACGC CGAGGACGAT
ACCGACGCCG CGCGACGGGA CGTCGACGCG GCACGGCTGG GCCCGGATGA CGTGCTGATC
GCGCTGGCGG CCAGCGGGCG CACCCCCTAC ACGCTGGCCT GCGTCGATGC GGCGCGGGCG
GCCGGCGCGC TTGCGATCGG CATCGCCAAC AGCGCGGAGG CCCCGCTGCT GGCACGCAGC
ACCTGCCCGG TCCTGGTCGA GACCGGGGCC GAGGCCATCG CGGGTTCGAC GCGCATGAAG
GCCGGCACGG CGCAGAAGAT CGTGCTGAAC CTGCTGTCCA CCGCGATGAT GATCGGGCTG
GGCCGCGTGC ATGCCGGCCG GATGGTGGAC ATGCGCGCGC GCAACGAGAA ACTGCGCCAC
CGCGCGGTGC GCATGGTACA GGACGTGACC GGCTGCACGG CACCGGAGGC CGCCGACGCG
CTGGCCCGCA CCGATGGACG GGTCAAGCCC GCGATCCTGG TGGCGCTGGG CCTGACGCCG
GACGAGGCCG CGGGCGCTCT GGCCCGCCAT GACGGCCGCC TGCGCGGGGC TCTCGGCTCC
GTGACGGAAA AATTCCGCCC GGTGCTTGCC AGCGCGCGCA AGGACTCATA G
 
Protein sequence
MPPAPPPFVP GTEAFNPATE ALDTWPVPVQ VATLWEGQMN AVAAIRPALA AIAAAVEAAL 
PRLRAGGRLA YAGAGSSGRL AAQDGAELEP TFDWPAARTI LLVAGGPRAL TEAVENAEDD
TDAARRDVDA ARLGPDDVLI ALAASGRTPY TLACVDAARA AGALAIGIAN SAEAPLLARS
TCPVLVETGA EAIAGSTRMK AGTAQKIVLN LLSTAMMIGL GRVHAGRMVD MRARNEKLRH
RAVRMVQDVT GCTAPEAADA LARTDGRVKP AILVALGLTP DEAAGALARH DGRLRGALGS
VTEKFRPVLA SARKDS