146 homologs were found in PanDaTox collection
for query gene SbBS512_E2800 on replicon NC_010658
Organism: Shigella boydii CDC 3083-94



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010658  SbBS512_E2800  N-acetylmuramic acid-6-phosphate etherase  100 
 
 
298 aa  600  1.0000000000000001e-171  Shigella boydii CDC 3083-94  Bacteria  normal  0.505825  n/a   
 
 
-
 
CP001509  ECD_02328  N-acetylmuramic acid-6-phosphate etherase  99.66 
 
 
298 aa  600  1e-170  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2714  N-acetylmuramic acid-6-phosphate etherase  99.66 
 
 
298 aa  599  1e-170  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02289  hypothetical protein  99.66 
 
 
298 aa  600  1e-170  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3658  N-acetylmuramic acid-6-phosphate etherase  99.33 
 
 
298 aa  597  1e-170  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1233  glucokinase regulatory-like protein  98.99 
 
 
298 aa  596  1e-169  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2564  N-acetylmuramic acid-6-phosphate etherase  98.99 
 
 
298 aa  596  1e-169  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1251  N-acetylmuramic acid-6-phosphate etherase  98.99 
 
 
298 aa  596  1e-169  Escherichia coli ATCC 8739  Bacteria  normal  0.674779  normal  0.258404 
 
 
-
 
NC_010498  EcSMS35_2583  N-acetylmuramic acid-6-phosphate etherase  96.31 
 
 
298 aa  578  1e-164  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001001  N-acetylmuramic acid 6-phosphate etherase  65.88 
 
 
300 aa  390  1e-107  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2585  N-acetylmuramic acid-6-phosphate etherase  63.42 
 
 
300 aa  359  3e-98  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1260  N-acetylmuramic acid-6-phosphate etherase  59.32 
 
 
300 aa  350  2e-95  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0172  N-acetylmuramic acid-6-phosphate etherase  57.63 
 
 
302 aa  340  2e-92  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3056  N-acetylmuramic acid-6-phosphate etherase  56.95 
 
 
308 aa  337  9.999999999999999e-92  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1219  N-acetylmuramic acid-6-phosphate etherase  56.61 
 
 
308 aa  335  5.999999999999999e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1143  N-acetylmuramic acid-6-phosphate etherase  57.63 
 
 
295 aa  333  2e-90  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3619  N-acetylmuramic acid-6-phosphate etherase  57.63 
 
 
295 aa  333  2e-90  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1249  N-acetylmuramic acid-6-phosphate etherase  57.63 
 
 
295 aa  333  2e-90  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.767258  n/a   
 
 
-
 
NC_008709  Ping_1065  N-acetylmuramic acid-6-phosphate etherase  57.14 
 
 
299 aa  331  7.000000000000001e-90  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3125  N-acetylmuramic acid-6-phosphate etherase  55.59 
 
 
307 aa  330  2e-89  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.32391  n/a   
 
 
-
 
NC_012880  Dd703_2775  N-acetylmuramic acid-6-phosphate etherase  54.92 
 
 
297 aa  326  3e-88  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3661  N-acetylmuramic acid-6-phosphate etherase  58.25 
 
 
297 aa  326  3e-88  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0221  N-acetylmuramic acid-6-phosphate etherase  54.39 
 
 
307 aa  323  2e-87  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00989  N-acetylmuramic acid-6-phosphate etherase  54.76 
 
 
308 aa  321  9.999999999999999e-87  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004409  N-acetylmuramic acid 6-phosphate etherase  53.92 
 
 
309 aa  319  3e-86  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3047  N-acetylmuramic acid-6-phosphate etherase  56.08 
 
 
297 aa  316  3e-85  Enterobacter sp. 638  Bacteria  normal  normal  0.0580573 
 
 
-
 
NC_011138  MADE_00595  glucokinase regulatory-like protein  54.58 
 
 
331 aa  315  5e-85  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0335  N-acetylmuramic acid-6-phosphate etherase  51.86 
 
 
303 aa  311  5.999999999999999e-84  Haemophilus somnus 129PT  Bacteria  normal  0.130147  n/a   
 
 
-
 
NC_013203  Apar_1199  glucokinase regulatory-like protein  54.05 
 
 
297 aa  311  9e-84  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1079  N-acetylmuramic acid-6-phosphate etherase  54.92 
 
 
313 aa  311  1e-83  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3803  N-acetylmuramic acid-6-phosphate etherase  49.66 
 
 
316 aa  301  6.000000000000001e-81  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.0010924  decreased coverage  0.000127342 
 
 
-
 
NC_003910  CPS_2881  N-acetylmuramic acid-6-phosphate etherase  49.83 
 
 
308 aa  299  3e-80  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2733  N-acetylmuramic acid-6-phosphate etherase  55.07 
 
 
297 aa  299  3e-80  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2774  N-acetylmuramic acid-6-phosphate etherase  55.07 
 
 
297 aa  299  4e-80  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2837  N-acetylmuramic acid-6-phosphate etherase  55.07 
 
 
297 aa  299  4e-80  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.718204 
 
 
-
 
NC_010001  Cphy_1121  glucokinase regulatory-like protein  51.53 
 
 
297 aa  298  7e-80  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2814  N-acetylmuramic acid-6-phosphate etherase  54.73 
 
 
297 aa  297  1e-79  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.728479 
 
 
-
 
NC_011205  SeD_A2949  N-acetylmuramic acid-6-phosphate etherase  54.73 
 
 
297 aa  297  1e-79  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2813  N-acetylmuramic acid-6-phosphate etherase  51.7 
 
 
295 aa  296  2e-79  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008528  OEOE_0038  N-acetylmuramic acid-6-phosphate etherase  52.88 
 
 
297 aa  295  7e-79  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3833  glucokinase regulatory-like protein  52.22 
 
 
294 aa  293  3e-78  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2753  glucokinase regulatory-like protein  51.52 
 
 
310 aa  293  3e-78  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1469  N-acetylmuramic acid-6-phosphate etherase  51.19 
 
 
295 aa  289  4e-77  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00569055  n/a   
 
 
-
 
NC_008228  Patl_4168  N-acetylmuramic acid-6-phosphate etherase  50 
 
 
307 aa  288  8e-77  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.396685  n/a   
 
 
-
 
NC_013525  Tter_1512  glucokinase regulatory-like protein  47.8 
 
 
307 aa  285  5.999999999999999e-76  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008530  LGAS_1857  N-acetylmuramic acid-6-phosphate etherase  49.49 
 
 
297 aa  280  2e-74  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00000411565  hitchhiker  0.0000000817589 
 
 
-
 
NC_005945  BAS0783  N-acetylmuramic acid-6-phosphate etherase  50.85 
 
 
294 aa  280  3e-74  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0822  N-acetylmuramic acid-6-phosphate etherase  50.85 
 
 
294 aa  280  3e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.199638  n/a   
 
 
-
 
NC_011725  BCB4264_A0876  N-acetylmuramic acid-6-phosphate etherase  50.51 
 
 
294 aa  280  3e-74  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4459  N-acetylmuramic acid-6-phosphate etherase  50.51 
 
 
294 aa  279  4e-74  Bacillus cereus G9842  Bacteria  normal  normal  0.772989 
 
 
-
 
NC_011773  BCAH820_0918  N-acetylmuramic acid-6-phosphate etherase  50.51 
 
 
294 aa  278  7e-74  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.20197e-42 
 
 
-
 
NC_003909  BCE_0913  N-acetylmuramic acid-6-phosphate etherase  50.51 
 
 
294 aa  278  1e-73  Bacillus cereus ATCC 10987  Bacteria  normal  0.163609  n/a   
 
 
-
 
NC_005957  BT9727_0732  N-acetylmuramic acid-6-phosphate etherase  50.85 
 
 
294 aa  278  1e-73  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.114997  n/a   
 
 
-
 
NC_011658  BCAH187_A0987  N-acetylmuramic acid-6-phosphate etherase  50.51 
 
 
294 aa  278  1e-73  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0732  N-acetylmuramic acid-6-phosphate etherase  49.83 
 
 
294 aa  277  2e-73  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0718  N-acetylmuramic acid-6-phosphate etherase  50.51 
 
 
294 aa  276  3e-73  Bacillus cereus E33L  Bacteria  normal  0.188142  n/a   
 
 
-
 
NC_008527  LACR_1241  N-acetylmuramic acid-6-phosphate etherase  49.66 
 
 
297 aa  276  4e-73  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0357447  n/a   
 
 
-
 
NC_009674  Bcer98_0670  N-acetylmuramic acid-6-phosphate etherase  49.49 
 
 
294 aa  276  4e-73  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1541  glucokinase regulatory-like protein  50.35 
 
 
291 aa  272  4.0000000000000004e-72  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0181  N-acetylmuramic acid-6-phosphate etherase  46.76 
 
 
298 aa  271  9e-72  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0176  N-acetylmuramic acid-6-phosphate etherase  46.76 
 
 
298 aa  270  2e-71  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2617  N-acetylmuramic acid-6-phosphate etherase  49.31 
 
 
304 aa  270  2.9999999999999997e-71  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.423001  normal 
 
 
-
 
NC_002976  SERP1899  N-acetylmuramic acid-6-phosphate etherase  45.24 
 
 
295 aa  264  1e-69  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0620  N-acetylmuramic acid-6-phosphate etherase  49.66 
 
 
301 aa  262  4.999999999999999e-69  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0973  glucokinase regulatory-like protein  46.44 
 
 
296 aa  261  8.999999999999999e-69  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_5694  N-acetylmuramic acid-6-phosphate etherase  46.96 
 
 
305 aa  257  2e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.324396  normal 
 
 
-
 
BN001302  ANIA_11038  glucokinase regulator family protein, putative (AFU_orthologue; AFUA_1G17490)  48.28 
 
 
373 aa  253  3e-66  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.515331 
 
 
-
 
NC_008255  CHU_3065  N-acetylmuramic acid-6-phosphate etherase  51.91 
 
 
270 aa  251  9.000000000000001e-66  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5916  glucokinase regulatory-like protein  52.85 
 
 
270 aa  248  1e-64  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3685  N-acetylmuramic acid-6-phosphate etherase  51.59 
 
 
267 aa  247  2e-64  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.137366 
 
 
-
 
NC_007509  Bcep18194_C7244  N-acetylmuramic acid-6-phosphate etherase  45.76 
 
 
301 aa  243  1.9999999999999999e-63  Burkholderia sp. 383  Bacteria  normal  0.304432  normal 
 
 
-
 
NC_014230  CA2559_09758  glucokinase regulator-related protein  49.8 
 
 
274 aa  242  7e-63  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.199964  n/a   
 
 
-
 
NC_009976  P9211_08691  sugar phosphate isomerase  43.49 
 
 
303 aa  241  7.999999999999999e-63  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.0143494 
 
 
-
 
NC_013132  Cpin_6538  N-acetylmuramic acid-6-phosphate etherase  49.42 
 
 
270 aa  239  4e-62  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.130206  normal  0.393534 
 
 
-
 
NC_013946  Mrub_2465  glucokinase regulatory-like protein  45.61 
 
 
299 aa  238  5.999999999999999e-62  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1663  glucokinase regulatory-like protein  50 
 
 
301 aa  234  1.0000000000000001e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.636119  normal  0.203154 
 
 
-
 
NC_013061  Phep_3780  N-acetylmuramic acid-6-phosphate etherase  50 
 
 
268 aa  233  3e-60  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_0315  N-acetylmuramic acid-6-phosphate etherase  40.96 
 
 
310 aa  232  5e-60  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2490  N-acetylmuramic acid-6-phosphate etherase  53.94 
 
 
270 aa  232  5e-60  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.000000186214  n/a   
 
 
-
 
NC_007333  Tfu_2324  N-acetylmuramic acid-6-phosphate etherase  43.39 
 
 
304 aa  229  5e-59  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_35990  N-acetylmuramic acid-6-phosphate etherase  45.67 
 
 
308 aa  229  6e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.065784  normal  0.17675 
 
 
-
 
NC_007413  Ava_0242  N-acetylmuramic acid-6-phosphate etherase  44.1 
 
 
307 aa  228  7e-59  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4817  N-acetylmuramic acid-6-phosphate etherase  47.72 
 
 
275 aa  228  7e-59  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0340  N-acetylmuramic acid-6-phosphate etherase  41.81 
 
 
307 aa  228  9e-59  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0916  N-acetylmuramic acid-6-phosphate etherase  43.99 
 
 
313 aa  227  2e-58  Cyanothece sp. PCC 7425  Bacteria  normal  0.799346  normal 
 
 
-
 
NC_014248  Aazo_4573  glucokinase regulatory-like protein  43.3 
 
 
306 aa  226  3e-58  'Nostoc azollae' 0708  Bacteria  normal  0.48035  n/a   
 
 
-
 
NC_008819  NATL1_09881  N-acetylmuramic acid-6-phosphate etherase  42.32 
 
 
310 aa  226  3e-58  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.165644 
 
 
-
 
NC_007604  Synpcc7942_2577  N-acetylmuramic acid-6-phosphate etherase  42.36 
 
 
307 aa  225  6e-58  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0238582  normal 
 
 
-
 
NC_013132  Cpin_6811  N-acetylmuramic acid-6-phosphate etherase  46.59 
 
 
266 aa  225  6e-58  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00997485  hitchhiker  0.000351646 
 
 
-
 
NC_013093  Amir_0268  N-acetylmuramic acid-6-phosphate etherase  45.17 
 
 
308 aa  224  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.26686  n/a   
 
 
-
 
NC_013161  Cyan8802_2060  N-acetylmuramic acid-6-phosphate etherase  40.82 
 
 
306 aa  223  4e-57  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25320  predicted sugar phosphate isomerase  46.79 
 
 
327 aa  222  4.9999999999999996e-57  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.00271606  n/a   
 
 
-
 
NC_011726  PCC8801_2034  N-acetylmuramic acid-6-phosphate etherase  40.82 
 
 
306 aa  222  4.9999999999999996e-57  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008820  P9303_15151  N-acetylmuramic acid-6-phosphate etherase  41.38 
 
 
316 aa  220  1.9999999999999999e-56  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.192171 
 
 
-
 
NC_011729  PCC7424_4977  N-acetylmuramic acid-6-phosphate etherase  41.92 
 
 
306 aa  220  3e-56  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.889603 
 
 
-
 
NC_010003  Pmob_0485  N-acetylmuramic acid-6-phosphate etherase  42.7 
 
 
298 aa  219  5e-56  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1095  N-acetylmuramic acid-6-phosphate etherase  41.92 
 
 
316 aa  218  1e-55  Synechococcus sp. CC9902  Bacteria  decreased coverage  0.00246557  n/a   
 
 
-
 
NC_012669  Bcav_0370  glucokinase regulatory-like protein  45.45 
 
 
307 aa  216  2.9999999999999998e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_1529  glucokinase regulatory-like protein  41.08 
 
 
295 aa  215  9e-55  Elusimicrobium minutum Pei191  Bacteria  hitchhiker  0.00174969  unclonable  2.72637e-19 
 
 
-
 
NC_014210  Ndas_0474  sugar isomerase (SIS)  44.33 
 
 
337 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.850822  normal 
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>