Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35990 |
Symbol | murQ |
ID | 8388920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3923681 |
End bp | 3924607 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977614 |
Product | N-acetylmuramic acid-6-phosphate etherase |
Protein accession | YP_003135381 |
Protein GI | 257057549 |
COG category | [R] General function prediction only |
COG ID | [COG2103] Predicted sugar phosphate isomerase |
TIGRFAM ID | [TIGR00274] N-acetylmuramic acid 6-phosphate etherase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.065784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.17675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTT CACCGCAGGT CGTGCACGTC GAGTCGCCCA CCGAGCGACG CAACCCGAAT ACGACTGACA TCGACCGGAT GTCGACCGCC GACATCCTCG CCGCCATCAA CGCCGAGGAC CAGACCGTCC CCGAGGCGGT TCGGCGGGCG TTGCCGGAGT TGGTGAAAGC GGTCGACGCG GCCACGGAGG CCTTACGCGG CGGGCATCGG GTCCACTACG TGGGCGCGGG CACCTCGGGG CGGCTGGCGG TGCTCGACGC CGCCGAACTG GTGCCCACGT ACAACGTGCC GGACGACTGG TTCGTCGCGC ACCACGCGGG CGGTCAACAA GCGCTGCGGA GCGCGGTGGA GAACGCCGAG GACGACGCCG AGGCCGGCGC CGCCGAATTG CGGGCGAGTG TGTCGCCCGG GGATTTCGTG CTGGGGCTGA CGGCCTCGGG ACGCACCCCG TTCGTGATCG GTGCGTTGGA GGGTGCAAAA CAGAGCGGCG CCACCACCGC GCTCGTGTCG TGCAACCCGG AAGCGTCCGT GCCCGACAGC GTGGACGTAC TGATCACCAT GGACACCGGT CCGGAGGTCA TCGCGGGTTC CACGCGGATG AAAGCCGGTA CGGCACAGAA GTTGCTGCTC ACCGCGTTCT CCACCGCCAC GATGATCAAG CTGGGGCGGA CGTACTCCAA TCTGATGGTC AGCGTGCGTG CGACCAACGC CAAGCTGCGA GGCCGCACCG TCCGCATCCT TCGCGAGGCC ACGGGGTTGA GCGACCAGGA CTGCAACGAG GCGCTCACCC GGGCCGACGG TGACCTGAAA GTCGCGCTCG TGCAATTGCT CGCCGACGTC GACGTCACCG ACGCCGTCGC GGCGCTCGAG GCCACGGGCG GGCACGTCCG AGCCGCGCTC GACGCGGTGC GGCCGACGGT GCCCTGA
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Protein sequence | MTVSPQVVHV ESPTERRNPN TTDIDRMSTA DILAAINAED QTVPEAVRRA LPELVKAVDA ATEALRGGHR VHYVGAGTSG RLAVLDAAEL VPTYNVPDDW FVAHHAGGQQ ALRSAVENAE DDAEAGAAEL RASVSPGDFV LGLTASGRTP FVIGALEGAK QSGATTALVS CNPEASVPDS VDVLITMDTG PEVIAGSTRM KAGTAQKLLL TAFSTATMIK LGRTYSNLMV SVRATNAKLR GRTVRILREA TGLSDQDCNE ALTRADGDLK VALVQLLADV DVTDAVAALE ATGGHVRAAL DAVRPTVP
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