11 homologs were found in PanDaTox collection
for query gene Gbem_2544 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2544  hypothetical protein  100 
 
 
155 aa  317  3.9999999999999996e-86  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1688  hypothetical protein  97.42 
 
 
210 aa  312  9.999999999999999e-85  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013037  Dfer_0676  hypothetical protein  49.66 
 
 
209 aa  139  9.999999999999999e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5259  hypothetical protein  37.66 
 
 
204 aa  100  8e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.542652  hitchhiker  0.000548538 
 
 
-
 
NC_009441  Fjoh_3148  hypothetical protein  37.06 
 
 
200 aa  95.1  3e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  0.613435  n/a   
 
 
-
 
NC_013132  Cpin_3920  hypothetical protein  33.11 
 
 
190 aa  73.2  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000000593759  hitchhiker  0.00522191 
 
 
-
 
NC_007954  Sden_3009  hypothetical protein  27.34 
 
 
190 aa  49.3  0.00002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0375  hypothetical protein  33.98 
 
 
189 aa  48.5  0.00003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2454  hypothetical protein  29.41 
 
 
188 aa  47.4  0.00008  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.185754  normal 
 
 
-
 
NC_007298  Daro_3616  hypothetical protein  27.2 
 
 
190 aa  47  0.0001  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000199395 
 
 
-
 
NC_007912  Sde_1036  hypothetical protein  25.96 
 
 
189 aa  42.7  0.002  Saccharophagus degradans 2-40  Bacteria  normal  0.0197931  normal 
 
 
-
 
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