Gene Cpin_5259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5259 
Symbol 
ID8361436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6656944 
End bp6657558 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID644967407 
Producthypothetical protein 
Protein accessionYP_003124891 
Protein GI256424238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.542652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000548538 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCTTCA CTGCTTTTAA GTTATTAAAA GACCAGTTAG ATAGTTATAT CCAGTCCTTT 
AACCCTATGG GAAACGACCC CGAAAGCCAT GTAGTGCTGG ACAATGTAGC TACGCTGGAA
ACACCTGACA GACCCCCGGG CGCAGAAGAA CGAATCATTC TGAGTATGGT GAATATAGAA
GAGGAAGCCA CCCTGAAAAA CAGTTCGCAT TTCTATAGAA ATGCGCAGGG CATTGCTTAT
CATAATCCTC CCATTTATCT CAACCTGTAC ATGTTGGTGT CGGCACATTA TAAAAACTAT
GAAGATGCGC TGTCACGACT TTCTCAGGCT ATTCAGTTCT TCCAGGGTAA AAGTAGTTTT
ACACTGAAGA ACTCTCCCAA CGAAGTCCTG ATCAATAGCG GTCAGGCGCT GGATGACCTG
CAGTTACACC TTGAACTGTT TTCCCTCTCA TTTGAACAAT TGAATCATCT ATGGGGTGCA
TTGGGTGGTA AACAAATGCC CAGTGTATTG TACAAAGTAA GACTTGTGAA GATCACAGAG
AACAGGATAA CAGGACTTGG AACTATTGTG GAGCAAATCC AGTCCAAAGA CAGTATTGCT
TTCCCCAAAT CATAA
 
Protein sequence
MIFTAFKLLK DQLDSYIQSF NPMGNDPESH VVLDNVATLE TPDRPPGAEE RIILSMVNIE 
EEATLKNSSH FYRNAQGIAY HNPPIYLNLY MLVSAHYKNY EDALSRLSQA IQFFQGKSSF
TLKNSPNEVL INSGQALDDL QLHLELFSLS FEQLNHLWGA LGGKQMPSVL YKVRLVKITE
NRITGLGTIV EQIQSKDSIA FPKS